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Lj2g3v0908560.1

Overview

Field Value
Gene ID Lj2g3v0908560
Transcript ID Lj2g3v0908560.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dentin sialophosphoprotein-like [Cicer arietinum] gi|502164221|ref|XP_004513087.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 669 669 2.80E-260
PANTHER 1 669 669 2.80E-260
Pfam 12 176 165 5.90E-59
Coils 22 53 32
MobiDBLite 207 294 88
MobiDBLite 324 388 65
MobiDBLite 533 555 23
MobiDBLite 581 640 60
MobiDBLite 663 738 76
MobiDBLite 772 1019 248
PANTHER 959 1034 76 2.80E-260
PANTHER 959 1034 76 2.80E-260

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

Expression data

Expression pattern

Expression pattern of Lj2g3v0908560.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0908560.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.