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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0914840 |
| Transcript ID | Lj2g3v0914840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chloroplast envelope membrane protein-like [Glycine max] gi|356495877|ref|XP_003516797.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 208 | 208 | – | – | |
| PANTHER | 1 | 431 | 431 | 4.50E-240 | – | |
| PANTHER | 1 | 431 | 431 | 4.50E-240 | – | |
| Coils | 110 | 130 | 21 | – | – | |
| Pfam | 201 | 429 | 229 | 1.60E-75 | ||
| Phobius | 209 | 229 | 21 | – | – | |
| Phobius | 230 | 306 | 77 | – | – | |
| TMHMM | 306 | 328 | 23 | – | – | |
| Phobius | 307 | 327 | 21 | – | – | |
| Phobius | 328 | 389 | 62 | – | – | |
| TMHMM | 352 | 374 | 23 | – | – | |
| TMHMM | 389 | 411 | 23 | – | – | |
| Phobius | 390 | 410 | 21 | – | – | |
| Phobius | 411 | 431 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj2g3v0914840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0914840.1, powered by CORGI.
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