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Lj2g3v0914850.1

Overview

Field	Value
Gene ID	Lj2g3v0914850
Transcript ID	Lj2g3v0914850.1
Related isoforms 4	Lj2g3v0914850.2 Lj2g3v0914850.3 Lj2g3v0914850.4 Lj2g3v0914850.5
Lotus japonicus genome version	MG20 v3.0
Description	Chaperone binding,ATPase activators [Theobroma cacao] gi\|508784952\|gb\|EOY32208.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	1	21	21	–	–
PANTHER	PTHR13009:SF5 View details on PTHR13009:SF5 Search for proteins/transripts with this domain View external data on PTHR13009:SF5	18	37	20	3.80E-81	–
PANTHER	PTHR13009 View details on PTHR13009 Search for proteins/transripts with this domain View external data on PTHR13009	18	37	20	3.80E-81	–
PANTHER	PTHR13009 View details on PTHR13009 Search for proteins/transripts with this domain View external data on PTHR13009	59	204	146	3.80E-81	–
PANTHER	PTHR13009:SF5 View details on PTHR13009:SF5 Search for proteins/transripts with this domain View external data on PTHR13009:SF5	59	204	146	3.80E-81	–
SUPERFAMILY	SSF103111 View details on SSF103111 Search for proteins/transripts with this domain View external data on SSF103111	65	203	139	1.96E-18	IPR015310 Show description in modal box View details on IPR015310 Search for proteins/transripts with this domain View on EBI InterPro Service
SMART	SM01000 View details on SM01000 Search for proteins/transripts with this domain View external data on SM01000	68	204	137	5.60E-19	IPR015310 Show description in modal box View details on IPR015310 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF09229 View details on PF09229 Search for proteins/transripts with this domain View external data on PF09229	68	202	135	1.10E-21	IPR015310 Show description in modal box View details on IPR015310 Search for proteins/transripts with this domain View on EBI InterPro Service

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0001671 View details of GO:0001671 AmiGO InterPro QuickGO	Molecular function	ATPase activator activity	Binds to and increases the ATP hydrolysis activity of an ATPase.	Subterm of View details of GO:0008047 View details of GO:0060590
GO:0051087 View details of GO:0051087 AmiGO InterPro QuickGO	Molecular function	Chaperone binding	Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.	Subterm of View details of GO:0005515

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj2g3v0914850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0914850.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.