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Lj2g3v1002550.1

Overview

Field Value
Gene ID Lj2g3v1002550
Transcript ID Lj2g3v1002550.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase fray2-like isoform X4 [Cicer arietinum] gi|502090562|ref|XP_004489269.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 6 403 398 0
PANTHER 6 403 398 0
Gene3D 11 124 114 1.80E-29
SUPERFAMILY 14 308 295 1.11E-81
CDD 15 277 263 8.07E-177
Pfam 16 277 262 2.30E-59
SMART 16 277 262 9.60E-91
ProSiteProfiles 16 277 262 47.82
ProSitePatterns 22 45 24
Gene3D 125 281 157 1.00E-51
Coils 308 328 21
MobiDBLite 428 477 50
MobiDBLite 491 526 36
Coils 629 663 35
PANTHER 641 663 23 0
PANTHER 641 663 23 0

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj2g3v1002550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1002550.1, powered by CORGI.

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