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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1019680 |
| Transcript ID | Lj2g3v1019680.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: auxin-induced protein 5NG4-like [Glycine max] gi|356571529|ref|XP_003553929.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 137 | 137 | 3.30E-63 | ||
| PANTHER | 1 | 137 | 137 | 3.30E-63 | – | |
| Phobius | 1 | 60 | 60 | – | – | |
| TMHMM | 13 | 31 | 19 | – | – | |
| TMHMM | 61 | 83 | 23 | – | – | |
| Phobius | 61 | 83 | 23 | – | – | |
| Phobius | 84 | 94 | 11 | – | – | |
| Phobius | 95 | 117 | 23 | – | – | |
| TMHMM | 95 | 117 | 23 | – | – | |
| Phobius | 118 | 139 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1019680.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1019680.3, powered by CORGI.
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