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Lj2g3v1201220.1

Overview

Field Value
Gene ID Lj2g3v1201220
Transcript ID Lj2g3v1201220.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein SRG1-like [Cicer arietinum] gi|502094956|ref|XP_004490337.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10209:SF168
1 90 90 3.30E-57 –
PANTHER
PTHR10209
1 90 90 3.30E-57 –
Gene3D
G3DSA:2.60.120.330
1 90 90 1.40E-35
IPR027443
SUPERFAMILY
SSF51197
3 92 90 8.93E-33 –
ProSiteProfiles
PS51471
18 94 77 8.964
IPR005123
Pfam
PF03171
22 92 71 1.10E-18
IPR005123

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj2g3v1201220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1201220.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.