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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1252690 |
| Transcript ID | Lj2g3v1252690.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ureide permease 2-like isoform X1 [Cicer arietinum] gi|502094312|ref|XP_004490188.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | – | – | |
| PANTHER | 9 | 409 | 401 | 4.30E-225 | ||
| PANTHER | 9 | 409 | 401 | 4.30E-225 | – | |
| TMHMM | 51 | 73 | 23 | – | – | |
| Phobius | 52 | 73 | 22 | – | – | |
| Phobius | 74 | 84 | 11 | – | – | |
| Pfam | 84 | 409 | 326 | 1.00E-169 | ||
| Phobius | 85 | 104 | 20 | – | – | |
| TMHMM | 88 | 107 | 20 | – | – | |
| Phobius | 105 | 123 | 19 | – | – | |
| Phobius | 124 | 144 | 21 | – | – | |
| TMHMM | 128 | 150 | 23 | – | – | |
| Phobius | 145 | 150 | 6 | – | – | |
| Phobius | 151 | 173 | 23 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 174 | 184 | 11 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 185 | 205 | 21 | – | – | |
| Phobius | 206 | 273 | 68 | – | – | |
| Phobius | 274 | 296 | 23 | – | – | |
| TMHMM | 276 | 298 | 23 | – | – | |
| Phobius | 297 | 315 | 19 | – | – | |
| Phobius | 316 | 341 | 26 | – | – | |
| TMHMM | 318 | 340 | 23 | – | – | |
| Phobius | 342 | 361 | 20 | – | – | |
| TMHMM | 360 | 377 | 18 | – | – | |
| Phobius | 362 | 381 | 20 | – | – | |
| Phobius | 382 | 386 | 5 | – | – | |
| TMHMM | 384 | 406 | 23 | – | – | |
| Phobius | 387 | 408 | 22 | – | – | |
| Phobius | 409 | 409 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Nitrogen compound transport | The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of Lj2g3v1252690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1252690.1, powered by CORGI.
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