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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1371320 |
| Transcript ID | Lj2g3v1371320.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Nucleotide-binding oligomerization domain-containing protein [Medicago truncatula] gi|357486129|ref|XP_003613352.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 22 | 22 | 3.10E-06 | ||
| SMART | 1 | 27 | 27 | 0.05 | – | |
| Gene3D | 2 | 222 | 221 | 9.80E-64 | ||
| SUPERFAMILY | 2 | 131 | 130 | 2.62E-34 | – | |
| PANTHER | 3 | 377 | 375 | 2.00E-112 | – | |
| Pfam | 27 | 50 | 24 | 7.60E-04 | ||
| SMART | 28 | 55 | 28 | 7.70E-05 | – | |
| SMART | 56 | 83 | 28 | 1.6 | – | |
| SMART | 84 | 111 | 28 | 2.3 | – | |
| SUPERFAMILY | 100 | 368 | 269 | 1.91E-66 | – | |
| SMART | 112 | 139 | 28 | 1.10E-05 | – | |
| Pfam | 112 | 134 | 23 | 6.00E-04 | ||
| SMART | 141 | 168 | 28 | 28 | – | |
| SMART | 169 | 196 | 28 | 2.30E-04 | – | |
| Pfam | 172 | 191 | 20 | 0.031 | ||
| SMART | 197 | 224 | 28 | 2.70E-04 | – | |
| Pfam | 197 | 219 | 23 | 8.60E-04 | ||
| Gene3D | 223 | 365 | 143 | 4.30E-38 | ||
| Pfam | 225 | 247 | 23 | 0.001 | ||
| SMART | 225 | 252 | 28 | 4.50E-04 | – | |
| SMART | 253 | 280 | 28 | 4.6 | – | |
| Pfam | 256 | 275 | 20 | 0.027 | ||
| Pfam | 280 | 303 | 24 | 0.0051 | ||
| SMART | 281 | 308 | 28 | 0.35 | – | |
| SMART | 310 | 337 | 28 | 0.03 | – | |
| Pfam | 313 | 332 | 20 | 1.40E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1371320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1371320.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.