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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • SM00368
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We have found 22 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.034s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. PREDICTED: protein TONSOKU-like [Glycine max] gi|356528540|ref|XP_003532859.1| chr1 15404600 15413979 -
n.a. RNI-like superfamily protein [Arabidopsis thaliana] gi|42569177|ref|NP_179611.2| chr1 53559876 53566372 +
n.a. RNI-like superfamily protein [Arabidopsis thaliana] gi|42569177|ref|NP_179611.2| chr1 53559876 53566372 +
n.a. Nucleotide-binding oligomerization domain-containing protein [Medicago truncatula] gi|357486129|ref|XP_003613352.1| chr2 21583337 21587858 +
n.a. Outer arm dynein light chain 1 protein [Arabidopsis thaliana] gi|30679417|ref|NP_192235.3| chr3 35662223 35677691 -
n.a. PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max] gi|356548547|ref|XP_003542662.1| chr4 27266156 27276269 +
n.a. PREDICTED: protein TONSOKU-like [Glycine max] gi|356528540|ref|XP_003532859.1| chr4 37041080 37050459 -
n.a. PREDICTED: RAN GTPase-activating protein 1-like [Glycine max] gi|356500208|ref|XP_003518925.1| chr5 15215592 15217855 -
n.a. PREDICTED: RAN GTPase-activating protein 2-like [Cicer arietinum] gi|502119876|ref|XP_004496765.1| chr5 29705491 29708449 +
n.a. Nucleotide-binding oligomerization domain-containing protein [Medicago truncatula] gi|357459937|ref|XP_003600250.1| chr6 7928575 7933952 +
n.a. Leucine-rich repeat, ribonuclease inhibitor subtype; TAIR: AT2G20210.1 RNI-like superfamily protein; Swiss-Prot: sp|Q7RTR2|NLRC3_HUMAN Protein NLRC3; TrEMBL-Plants: tr|I1N9Y2|I1N9Y2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0701100 LjG1.1_chr1 126919014 126926264 -
n.a. RAN GTPase-activating 2-like protein; TAIR: AT1G10510.1 RNI-like superfamily protein; Swiss-Prot: sp|Q7RTR2|NLRC3_HUMAN Protein NLRC3; TrEMBL-Plants: tr|G7K465|G7K465_MEDTR LRR ribonuclease inhibitor domain protein; Found in the gene: LotjaGi2g1v0314300 LjG1.1_chr2 78951055 78958934 +
n.a. F-box/LRR-repeat protein; TAIR: AT1G15740.1 Leucine-rich repeat family protein; Swiss-Prot: sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16; TrEMBL-Plants: tr|I1KGY2|I1KGY2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0353800 LjG1.1_chr3 73485681 73495542 -
n.a. Leucine-rich repeat (LRR) family protein; TAIR: AT1G15740.1 Leucine-rich repeat family protein; Swiss-Prot: sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14; TrEMBL-Plants: tr|A0A151SRH6|A0A151SRH6_CAJCA F-box/LRR-repeat protein 14; Found in the gene: LotjaGi4g1v0280400 LjG1.1_chr4 65135492 65146578 +
n.a. Leucine-rich repeat (LRR) family protein; TAIR: AT1G15740.1 Leucine-rich repeat family protein; Swiss-Prot: sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14; TrEMBL-Plants: tr|A0A151SRH6|A0A151SRH6_CAJCA F-box/LRR-repeat protein 14; Found in the gene: LotjaGi4g1v0280400 LjG1.1_chr4 65136509 65145098 +
n.a. Protein TONSOKU; TAIR: AT3G18730.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q6Q4D0|TONS_ARATH Protein TONSOKU; TrEMBL-Plants: tr|I1KTF7|I1KTF7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0408000 LjG1.1_chr4 78393767 78403544 +
n.a. RAN GTPase activating protein 2; TAIR: AT3G63130.1 RAN GTPase activating protein 1; Swiss-Prot: sp|Q9LE82|RAGP1_ARATH RAN GTPase-activating protein 1; TrEMBL-Plants: tr|A0A0L9TXY1|A0A0L9TXY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0167100 LjG1.1_chr5 42606007 42609217 -
n.a. RAN GTPase activating protein 2; TAIR: AT3G63130.1 RAN GTPase activating protein 1; Swiss-Prot: sp|Q9LE82|RAGP1_ARATH RAN GTPase-activating protein 1; TrEMBL-Plants: tr|A0A0L9TXY1|A0A0L9TXY1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0167100 LjG1.1_chr5 42606560 42608161 -
n.a. RAN GTPase-activating protein 2; TAIR: AT5G19320.1 RAN GTPase activating protein 2; Swiss-Prot: sp|Q9M651|RAGP2_ARATH RAN GTPase-activating protein 2; TrEMBL-Plants: tr|I1NGB7|I1NGB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316600 LjG1.1_chr5 63434476 63437717 +
n.a. RAN GTPase-activating protein 2; TAIR: AT5G19320.1 RAN GTPase activating protein 2; Swiss-Prot: sp|Q9M651|RAGP2_ARATH RAN GTPase-activating protein 2; TrEMBL-Plants: tr|I1NGB7|I1NGB7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316600 LjG1.1_chr5 63435674 63437365 +
n.a. Tornado 1; TAIR: AT5G55540.1 tornado 1; Swiss-Prot: sp|Q9FJ57|TRN1_ARATH Protein TORNADO 1; TrEMBL-Plants: tr|A0A0B2SG74|A0A0B2SG74_GLYSO Protein NLRC3; Found in the gene: LotjaGi6g1v0149700 LjG1.1_chr6 42565745 42571698 +
n.a. Tornado 1; TAIR: AT5G55540.1 tornado 1; Swiss-Prot: sp|Q9FJ57|TRN1_ARATH Protein TORNADO 1; TrEMBL-Plants: tr|I1KYG3|I1KYG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0149700 LjG1.1_chr6 42566179 42569542 +