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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1375550 |
| Transcript ID | Lj2g3v1375550.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleobase-ascorbate transporter 6-like [Cicer arietinum] gi|502154845|ref|XP_004509863.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 44 | 44 | – | – | |
| PANTHER | 3 | 533 | 531 | 0 | ||
| PANTHER | 3 | 533 | 531 | 0 | – | |
| Pfam | 39 | 444 | 406 | 3.80E-66 | ||
| TMHMM | 40 | 62 | 23 | – | – | |
| Phobius | 45 | 63 | 19 | – | – | |
| Phobius | 64 | 74 | 11 | – | – | |
| TMHMM | 74 | 96 | 23 | – | – | |
| Phobius | 75 | 94 | 20 | – | – | |
| Phobius | 95 | 99 | 5 | – | – | |
| TMHMM | 100 | 119 | 20 | – | – | |
| Phobius | 100 | 119 | 20 | – | – | |
| Phobius | 120 | 139 | 20 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 140 | 158 | 19 | – | – | |
| Phobius | 159 | 163 | 5 | – | – | |
| Phobius | 164 | 182 | 19 | – | – | |
| Phobius | 183 | 188 | 6 | – | – | |
| Phobius | 189 | 206 | 18 | – | – | |
| Phobius | 207 | 225 | 19 | – | – | |
| TMHMM | 224 | 246 | 23 | – | – | |
| Phobius | 226 | 246 | 21 | – | – | |
| Phobius | 247 | 288 | 42 | – | – | |
| Phobius | 289 | 310 | 22 | – | – | |
| TMHMM | 290 | 312 | 23 | – | – | |
| Phobius | 311 | 329 | 19 | – | – | |
| TMHMM | 327 | 349 | 23 | – | – | |
| Phobius | 330 | 351 | 22 | – | – | |
| Phobius | 352 | 371 | 20 | – | – | |
| TMHMM | 370 | 392 | 23 | – | – | |
| Phobius | 372 | 391 | 20 | – | – | |
| Phobius | 392 | 396 | 5 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| Phobius | 397 | 415 | 19 | – | – | |
| Phobius | 416 | 426 | 11 | – | – | |
| Phobius | 427 | 443 | 17 | – | – | |
| Phobius | 444 | 469 | 26 | – | – | |
| Phobius | 470 | 488 | 19 | – | – | |
| Phobius | 489 | 533 | 45 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1375550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1375550.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.