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Lj2g3v1451710.1

Overview

Field Value
Gene ID Lj2g3v1451710
Transcript ID Lj2g3v1451710.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor bHLH131-like [Cicer arietinum] gi|502092741|ref|XP_004489760.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12565:SF119
41 191 151 1.80E-71 –
PANTHER
PTHR12565
41 191 151 1.80E-71 –
ProSiteProfiles
PS50888
51 100 50 14.195
IPR011598
Pfam
PF00010
54 100 47 1.30E-07
IPR011598
CDD
cd00083
54 105 52 1.31E-07 –
Gene3D
G3DSA:4.10.280.10
55 108 54 1.60E-12
IPR011598
SUPERFAMILY
SSF47459
55 109 55 2.75E-12
IPR011598
SMART
SM00353
57 106 50 4.00E-08
IPR011598
Coils
Coil
90 110 21 – –
Gene3D
G3DSA:3.30.70.260
137 200 64 3.00E-08 –
CDD
cd04873
140 184 45 2.41E-07 –
SUPERFAMILY
SSF55021
140 203 64 4.08E-08 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj2g3v1451710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1451710.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.