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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1455090 |
| Transcript ID | Lj2g3v1455090.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleobase-ascorbate transporter 11-like [Glycine max] gi|356531353|ref|XP_003534242.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 228 | 228 | – | – | |
| MobiDBLite | 1 | 48 | 48 | – | – | |
| MobiDBLite | 72 | 148 | 77 | – | – | |
| PANTHER | 168 | 443 | 276 | 0 | ||
| PANTHER | 168 | 443 | 276 | 0 | – | |
| TMHMM | 225 | 247 | 23 | – | – | |
| Pfam | 229 | 648 | 420 | 8.30E-69 | ||
| Phobius | 229 | 251 | 23 | – | – | |
| Phobius | 252 | 262 | 11 | – | – | |
| TMHMM | 262 | 284 | 23 | – | – | |
| Phobius | 263 | 283 | 21 | – | – | |
| Phobius | 284 | 288 | 5 | – | – | |
| TMHMM | 289 | 307 | 19 | – | – | |
| Phobius | 289 | 307 | 19 | – | – | |
| Phobius | 308 | 327 | 20 | – | – | |
| TMHMM | 327 | 349 | 23 | – | – | |
| Phobius | 328 | 349 | 22 | – | – | |
| Phobius | 350 | 354 | 5 | – | – | |
| TMHMM | 351 | 373 | 23 | – | – | |
| Phobius | 355 | 374 | 20 | – | – | |
| Phobius | 375 | 385 | 11 | – | – | |
| TMHMM | 383 | 400 | 18 | – | – | |
| Phobius | 386 | 404 | 19 | – | – | |
| Phobius | 405 | 409 | 5 | – | – | |
| TMHMM | 407 | 429 | 23 | – | – | |
| Phobius | 410 | 435 | 26 | – | – | |
| Phobius | 436 | 571 | 136 | – | – | |
| PANTHER | 462 | 651 | 190 | 0 | ||
| PANTHER | 462 | 651 | 190 | 0 | – | |
| TMHMM | 484 | 506 | 23 | – | – | |
| Phobius | 572 | 594 | 23 | – | – | |
| TMHMM | 572 | 594 | 23 | – | – | |
| Phobius | 595 | 599 | 5 | – | – | |
| TMHMM | 598 | 620 | 23 | – | – | |
| Phobius | 600 | 620 | 21 | – | – | |
| Phobius | 621 | 631 | 11 | – | – | |
| TMHMM | 627 | 649 | 23 | – | – | |
| Phobius | 632 | 648 | 17 | – | – | |
| Phobius | 649 | 682 | 34 | – | – | |
| PANTHER | 671 | 749 | 79 | 0 | ||
| PANTHER | 671 | 749 | 79 | 0 | – | |
| TMHMM | 681 | 703 | 23 | – | – | |
| Phobius | 683 | 703 | 21 | – | – | |
| Phobius | 704 | 749 | 46 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1455090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1455090.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.