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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1536260 |
| Transcript ID | Lj2g3v1536260.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Early-responsive to dehydration stress protein isoform 2 [Theobroma cacao] gi|508778022|gb|EOY25278.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 750 | 750 | 0 | – | |
| PANTHER | 1 | 750 | 750 | 0 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 6 | 28 | 23 | – | – | |
| Pfam | 7 | 178 | 172 | 3.20E-45 | ||
| Phobius | 29 | 107 | 79 | – | – | |
| Phobius | 108 | 133 | 26 | – | – | |
| TMHMM | 108 | 130 | 23 | – | – | |
| Phobius | 134 | 156 | 23 | – | – | |
| Phobius | 157 | 176 | 20 | – | – | |
| TMHMM | 157 | 176 | 20 | – | – | |
| Phobius | 177 | 373 | 197 | – | – | |
| Pfam | 199 | 361 | 163 | 2.60E-43 | ||
| Pfam | 372 | 644 | 273 | 3.90E-83 | ||
| TMHMM | 374 | 396 | 23 | – | – | |
| Phobius | 374 | 398 | 25 | – | – | |
| Phobius | 399 | 417 | 19 | – | – | |
| Phobius | 418 | 445 | 28 | – | – | |
| TMHMM | 423 | 445 | 23 | – | – | |
| Phobius | 446 | 465 | 20 | – | – | |
| Phobius | 466 | 485 | 20 | – | – | |
| TMHMM | 466 | 485 | 20 | – | – | |
| Phobius | 486 | 572 | 87 | – | – | |
| Phobius | 573 | 603 | 31 | – | – | |
| TMHMM | 579 | 601 | 23 | – | – | |
| Phobius | 604 | 628 | 25 | – | – | |
| Phobius | 629 | 646 | 18 | – | – | |
| Phobius | 647 | 651 | 5 | – | – | |
| Phobius | 652 | 670 | 19 | – | – | |
| Phobius | 671 | 795 | 125 | – | – | |
| MobiDBLite | 731 | 795 | 65 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj2g3v1536260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1536260.1, powered by CORGI.
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