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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1536260 |
| Transcript ID | Lj2g3v1536260.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Early-responsive to dehydration stress protein isoform 2 [Theobroma cacao] gi|508778022|gb|EOY25278.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | – | – | |
| PANTHER | 1 | 673 | 673 | 0 | – | |
| PANTHER | 1 | 673 | 673 | 0 | – | |
| Pfam | 2 | 101 | 100 | 3.60E-29 | ||
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 31 | 56 | 26 | – | – | |
| Phobius | 57 | 79 | 23 | – | – | |
| TMHMM | 80 | 99 | 20 | – | – | |
| Phobius | 80 | 99 | 20 | – | – | |
| Phobius | 100 | 296 | 197 | – | – | |
| Pfam | 122 | 284 | 163 | 2.20E-43 | ||
| Pfam | 295 | 567 | 273 | 3.10E-83 | ||
| TMHMM | 297 | 319 | 23 | – | – | |
| Phobius | 297 | 321 | 25 | – | – | |
| Phobius | 322 | 340 | 19 | – | – | |
| Phobius | 341 | 368 | 28 | – | – | |
| TMHMM | 346 | 368 | 23 | – | – | |
| Phobius | 369 | 388 | 20 | – | – | |
| Phobius | 389 | 408 | 20 | – | – | |
| TMHMM | 389 | 408 | 20 | – | – | |
| Phobius | 409 | 495 | 87 | – | – | |
| Phobius | 496 | 526 | 31 | – | – | |
| TMHMM | 502 | 524 | 23 | – | – | |
| Phobius | 527 | 551 | 25 | – | – | |
| Phobius | 552 | 569 | 18 | – | – | |
| Phobius | 570 | 574 | 5 | – | – | |
| Phobius | 575 | 593 | 19 | – | – | |
| Phobius | 594 | 718 | 125 | – | – | |
| MobiDBLite | 654 | 718 | 65 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj2g3v1536260.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1536260.2, powered by CORGI.
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