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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1549780 |
| Transcript ID | Lj2g3v1549780.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: formin-like protein 20-like [Glycine max] gi|356513519|ref|XP_003525461.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 197 | 197 | 0 | – | |
| PANTHER | 1 | 197 | 197 | 0 | – | |
| SUPERFAMILY | 20 | 187 | 168 | 3.53E-05 | ||
| SMART | 198 | 338 | 141 | 2.40E-45 | ||
| Pfam | 199 | 337 | 139 | 2.40E-30 | ||
| ProSiteProfiles | 200 | 339 | 140 | 29.905 | ||
| SUPERFAMILY | 200 | 339 | 140 | 1.11E-23 | ||
| Gene3D | 200 | 340 | 141 | 1.70E-16 | – | |
| PANTHER | 254 | 611 | 358 | 0 | – | |
| PANTHER | 254 | 611 | 358 | 0 | – | |
| MobiDBLite | 408 | 453 | 46 | – | – | |
| MobiDBLite | 466 | 815 | 350 | – | – | |
| PRINTS | 470 | 482 | 13 | 4.90E-09 | – | |
| PRINTS | 486 | 502 | 17 | 4.90E-09 | – | |
| SMART | 501 | 1200 | 700 | 8.60E-61 | ||
| PRINTS | 512 | 524 | 13 | 4.90E-09 | – | |
| PRINTS | 528 | 549 | 22 | 4.90E-09 | – | |
| PRINTS | 549 | 565 | 17 | 4.90E-09 | – | |
| PRINTS | 567 | 584 | 18 | 4.90E-09 | – | |
| PANTHER | 633 | 748 | 116 | 0 | – | |
| PANTHER | 633 | 748 | 116 | 0 | – | |
| ProSiteProfiles | 807 | 1200 | 394 | 71.484 | ||
| PANTHER | 810 | 1198 | 389 | 0 | – | |
| PANTHER | 810 | 1198 | 389 | 0 | – | |
| Pfam | 812 | 1182 | 371 | 3.60E-116 | ||
| MobiDBLite | 859 | 880 | 22 | – | – | |
| SUPERFAMILY | 882 | 1199 | 318 | 5.89E-100 | – | |
| Coils | 1088 | 1115 | 28 | – | – | |
| Coils | 1182 | 1200 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v1549780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1549780.1, powered by CORGI.
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