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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1549780 |
| Transcript ID | Lj2g3v1549780.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Formin-like protein, partial [Medicago truncatula] gi|357484593|ref|XP_003612584.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 197 | 197 | 0 | – | |
| PANTHER | 1 | 197 | 197 | 0 | – | |
| SUPERFAMILY | 20 | 187 | 168 | 3.88E-05 | ||
| SMART | 198 | 969 | 772 | 7.60E-30 | ||
| Pfam | 199 | 337 | 139 | 2.50E-30 | ||
| Gene3D | 200 | 340 | 141 | 1.70E-16 | – | |
| SUPERFAMILY | 200 | 339 | 140 | 1.14E-23 | ||
| ProSiteProfiles | 200 | 339 | 140 | 29.905 | ||
| PANTHER | 254 | 585 | 332 | 0 | – | |
| PANTHER | 254 | 585 | 332 | 0 | – | |
| MobiDBLite | 408 | 453 | 46 | – | – | |
| MobiDBLite | 466 | 849 | 384 | – | – | |
| PRINTS | 470 | 482 | 13 | 5.80E-09 | – | |
| PRINTS | 486 | 502 | 17 | 5.80E-09 | – | |
| SMART | 501 | 1234 | 734 | 4.90E-63 | ||
| PRINTS | 512 | 524 | 13 | 5.80E-09 | – | |
| PRINTS | 528 | 549 | 22 | 5.80E-09 | – | |
| PRINTS | 549 | 565 | 17 | 5.80E-09 | – | |
| PRINTS | 567 | 584 | 18 | 5.80E-09 | – | |
| PANTHER | 635 | 782 | 148 | 0 | – | |
| PANTHER | 635 | 782 | 148 | 0 | – | |
| ProSiteProfiles | 841 | 1234 | 394 | 71.484 | ||
| PANTHER | 844 | 1232 | 389 | 0 | – | |
| PANTHER | 844 | 1232 | 389 | 0 | – | |
| Pfam | 846 | 1216 | 371 | 3.80E-116 | ||
| MobiDBLite | 893 | 914 | 22 | – | – | |
| SUPERFAMILY | 916 | 1233 | 318 | 6.28E-100 | – | |
| Coils | 1122 | 1149 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v1549780.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1549780.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.