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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1560880 |
| Transcript ID | Lj2g3v1560880.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WAT1-related protein At4g19185-like isoform X1 [Cicer arietinum] gi|502161864|ref|XP_004512310.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 11 | 360 | 350 | 4.80E-200 | ||
| PANTHER | 11 | 360 | 350 | 4.80E-200 | – | |
| TMHMM | 21 | 38 | 18 | – | – | |
| Phobius | 21 | 43 | 23 | – | – | |
| Pfam | 23 | 160 | 138 | 1.00E-15 | ||
| Phobius | 44 | 48 | 5 | – | – | |
| TMHMM | 48 | 70 | 23 | – | – | |
| Phobius | 49 | 71 | 23 | – | – | |
| SUPERFAMILY | 55 | 162 | 108 | 2.62E-09 | – | |
| Phobius | 72 | 82 | 11 | – | – | |
| TMHMM | 83 | 105 | 23 | – | – | |
| Phobius | 83 | 106 | 24 | – | – | |
| Phobius | 107 | 111 | 5 | – | – | |
| Phobius | 112 | 132 | 21 | – | – | |
| TMHMM | 115 | 137 | 23 | – | – | |
| Phobius | 133 | 143 | 11 | – | – | |
| TMHMM | 144 | 166 | 23 | – | – | |
| Phobius | 144 | 164 | 21 | – | – | |
| Phobius | 165 | 208 | 44 | – | – | |
| Phobius | 209 | 227 | 19 | – | – | |
| TMHMM | 210 | 232 | 23 | – | – | |
| Pfam | 211 | 346 | 136 | 9.10E-14 | ||
| Phobius | 228 | 238 | 11 | – | – | |
| TMHMM | 239 | 261 | 23 | – | – | |
| Phobius | 239 | 260 | 22 | – | – | |
| SUPERFAMILY | 246 | 351 | 106 | 3.53E-11 | – | |
| Phobius | 261 | 271 | 11 | – | – | |
| Phobius | 272 | 291 | 20 | – | – | |
| Phobius | 292 | 297 | 6 | – | – | |
| Phobius | 298 | 321 | 24 | – | – | |
| TMHMM | 321 | 343 | 23 | – | – | |
| Phobius | 322 | 326 | 5 | – | – | |
| Phobius | 327 | 345 | 19 | – | – | |
| Phobius | 346 | 396 | 51 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1560880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1560880.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.