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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1613100 |
| Transcript ID | Lj2g3v1613100.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Syntaxin-binding protein [Medicago truncatula] gi|357484159|ref|XP_003612366.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 750 | 750 | 0 | – | |
| PANTHER | 1 | 750 | 750 | 0 | – | |
| Gene3D | 45 | 300 | 256 | 3.70E-13 | ||
| SUPERFAMILY | 52 | 286 | 235 | 1.20E-21 | – | |
| SMART | 220 | 260 | 41 | 13 | ||
| SUPERFAMILY | 360 | 661 | 302 | 4.21E-14 | ||
| Gene3D | 368 | 660 | 293 | 1.10E-11 | ||
| SMART | 436 | 481 | 46 | 260 | ||
| SUPERFAMILY | 447 | 537 | 91 | 1.20E-21 | – | |
| SMART | 494 | 533 | 40 | 170 | ||
| SMART | 561 | 596 | 36 | 0.65 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1613100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1613100.1, powered by CORGI.
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