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SSF101908

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 21

Transcript Name Description Predicted domains Domain count
Lj1g3v1650120.1
– PREDICTED: protein CYPRO4-like [Glycine max] gi|356510402|ref|XP_003523927.1|
Domains
9
Lj2g3v1613100.1
– Syntaxin-binding protein [Medicago truncatula] gi|357484159|ref|XP_003612366.1|
Domains
9
Lj2g3v2660400.1
– DEM2 [Medicago truncatula] gi|357475399|ref|XP_003607985.1|
Domains
8
Lj5g3v2288600.1
– PREDICTED: splicing factor 3B subunit 3-like [Glycine max] gi|356576847|ref|XP_003556541.1|
Domains
11
Lj6g3v0003490.1
– Transducin/WD40 domain-containing protein-like protein [Arabidopsis thaliana] gi|79474482|ref|NP_193167.3|
Domains
6
Lj6g3v0003490.2
– Transducin/WD40 domain-containing protein-like protein [Arabidopsis thaliana] gi|79474482|ref|NP_193167.3|
Domains
6
LotjaGi1g1v0354900.1
– Protein CYPRO4; TAIR: AT4G33400.1 Vacuolar import/degradation, Vid27-related protein; Swiss-Prot: sp|P40781|CYPR4_CYNCA Protein CYPRO4; TrEMBL-Plants: tr|I1JTJ3|I1JTJ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0354900
Domains
10
LotjaGi1g1v0519700.1
– Auxin transport protein BIG; TAIR: AT3G02260.2 auxin transport protein (BIG); Swiss-Prot: sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr|G7KRX3|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700
Domains
23
LotjaGi1g1v0519700.2
– Auxin transport protein BIG; TAIR: AT3G02260.4 auxin transport protein (BIG); Swiss-Prot: sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG; TrEMBL-Plants: tr|G7KRX3|G7KRX3_MEDTR Auxin transporter BIG; Found in the gene: LotjaGi1g1v0519700
Domains
21
LotjaGi2g1v0354800.1
– Syntaxin-binding protein 5; TAIR: AT4G35560.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q9WU70|STXB5_RAT Syntaxin-binding protein 5; TrEMBL-Plants: tr|K7LNP1|K7LNP1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0354800
Domains
14
LotjaGi3g1v0007100.1
– Topless-related protein 1; TAIR: AT1G15750.1 Transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q94AI7|TPL_ARATH Protein TOPLESS; TrEMBL-Plants: tr|A0A151SPV1|A0A151SPV1_CAJCA Vegetative incompatibility protein HET-E-1; Found in the gene: LotjaGi3g1v0007100
Domains
17
LotjaGi3g1v0100700.2
– Retinoblastoma-binding protein 5; TAIR: AT3G21060.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q5E915|RBBP_ARATH Protein RBL; TrEMBL-Plants: tr|I3SQI4|I3SQI4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0100700
Domains
9
LotjaGi3g1v0100700.3
– Retinoblastoma-binding protein 5; TAIR: AT3G21060.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q5E915|RBBP_ARATH Protein RBL; TrEMBL-Plants: tr|I3SQI4|I3SQI4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0100700
Domains
9
LotjaGi3g1v0424400.1
– F-box protein family; TAIR: AT3G16210.1 F-box family protein; Swiss-Prot: sp|Q9LU24|FB145_ARATH Putative F-box protein At3g16210; TrEMBL-Plants: tr|K7LIU0|K7LIU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0424400
Domains
12
LotjaGi3g1v0424400.5
– F-box protein family; TAIR: AT3G16210.1 F-box family protein; Swiss-Prot: sp|Q9LU24|FB145_ARATH Putative F-box protein At3g16210; TrEMBL-Plants: tr|K7LIU0|K7LIU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0424400
Domains
12
LotjaGi3g1v0513100.1
– Coatomer subunit alpha; TAIR: AT2G21390.1 Coatomer, alpha subunit; Swiss-Prot: sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2; TrEMBL-Plants: tr|Q70I39|Q70I39_LOTJA Coatomer subunit alpha; Found in the gene: LotjaGi3g1v0513100
Domains
26
LotjaGi3g1v0513100.2
– Coatomer subunit alpha; TAIR: AT2G21390.1 Coatomer, alpha subunit; Swiss-Prot: sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2; TrEMBL-Plants: tr|Q70I39|Q70I39_LOTJA Coatomer subunit alpha; Found in the gene: LotjaGi3g1v0513100
Domains
26
LotjaGi4g1v0073700.1
– Protein CYPRO4; TAIR: AT3G19240.1 Vacuolar import/degradation, Vid27-related protein; Swiss-Prot: sp|P40781|CYPR4_CYNCA Protein CYPRO4; TrEMBL-Plants: tr|G7JL95|G7JL95_MEDTR Vacuolar import/degradation, VID27-like protein; Found in the gene: LotjaGi4g1v0073700
Domains
9
LotjaGi5g1v0358200.1
– Splicing factor 3B subunit-like protein; TAIR: AT3G55200.1 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; Swiss-Prot: sp|A0JN52|SF3B3_BOVIN Splicing factor 3B subunit 3; TrEMBL-Plants: tr|V7BAV6|V7BAV6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0358200
Domains
11
LotjaGi5g1v0358200.4
– Splicing factor 3B subunit-like protein; TAIR: AT3G55200.1 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; Swiss-Prot: sp|A0JN52|SF3B3_BOVIN Splicing factor 3B subunit 3; TrEMBL-Plants: tr|V7BAV6|V7BAV6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0358200
Domains
11
LotjaGi6g1v0003500.1
– Transducin/WD40 repeat-like superfamily protein; TAIR: AT4G14310.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|F4JUQ2|KCAI_ARATH KIN14B-interacting protein At4g14310; TrEMBL-Plants: tr|A0A072VSI4|A0A072VSI4_MEDTR Transducin/WD40 domain-like protein, putative; Found in the gene: LotjaGi6g1v0003500
Domains
5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 4.76