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Lj2g3v1646570.2

Overview

Field Value
Gene ID Lj2g3v1646570
Transcript ID Lj2g3v1646570.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: isocitrate dehydrogenase [NAD] gi|502161678|ref|XP_004512246.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11835:SF51
1 235 235 1.40E-184 –
PANTHER
PTHR11835
1 235 235 1.40E-184
IPR001804
SMART
SM01329
1 236 236 9.70E-62
IPR024084
SUPERFAMILY
SSF53659
4 228 225 1.73E-79 –
Gene3D
G3DSA:3.40.718.10
4 229 226 2.10E-89
IPR024084
Pfam
PF00180
18 228 211 3.50E-57
IPR024084

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016616
Molecular function Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj2g3v1646570.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1646570.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.