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Lj2g3v1802020.1

Overview

Field Value
Gene ID Lj2g3v1802020
Transcript ID Lj2g3v1802020.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: minor allergen Alt a 7-like [Glycine max] gi|356538142|ref|XP_003537563.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 28 28 – –
PANTHER
PTHR30546:SF3
46 260 215 1.20E-160 –
PANTHER
PTHR30546
46 260 215 1.20E-160 –
Hamap
MF_01017
61 261 201 31.039
IPR010089
Gene3D
G3DSA:3.40.50.360
61 261 201 1.10E-72
IPR029039
TIGRFAM
TIGR01755
63 259 197 2.30E-62
IPR010089
SUPERFAMILY
SSF52218
63 259 197 4.83E-52
IPR029039
ProSiteProfiles
PS50902
64 252 189 20.278
IPR008254
Pfam
PF03358
115 203 89 6.00E-11
IPR005025

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003955
Molecular function NAD(P)H dehydrogenase (quinone) activity Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone.
Subterm of
GO:0010181
Molecular function FMN binding Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj2g3v1802020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1802020.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.