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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1904510 |
| Transcript ID | Lj2g3v1904510.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cyclin-D3-3-like [Cicer arietinum] gi|502152809|ref|XP_004509104.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 73 | 73 | – | – | |
| PANTHER | 3 | 330 | 328 | 8.50E-173 | – | |
| PANTHER | 3 | 330 | 328 | 8.50E-173 | – | |
| SUPERFAMILY | 34 | 169 | 136 | 4.33E-31 | ||
| Pfam | 42 | 169 | 128 | 1.70E-26 | ||
| Gene3D | 66 | 162 | 97 | 7.80E-28 | ||
| CDD | 67 | 161 | 95 | 5.63E-12 | – | |
| SMART | 73 | 162 | 90 | 8.70E-13 | ||
| TMHMM | 74 | 96 | 23 | – | – | |
| Phobius | 74 | 96 | 23 | – | – | |
| Phobius | 97 | 330 | 234 | – | – | |
| SUPERFAMILY | 153 | 271 | 119 | 4.31E-09 | ||
| Gene3D | 163 | 269 | 107 | 2.50E-09 | ||
| SMART | 171 | 299 | 129 | 3.80E-07 | ||
| Pfam | 171 | 279 | 109 | 3.70E-17 | ||
| SMART | 175 | 263 | 89 | 0.9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
Expression pattern of Lj2g3v1904510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1904510.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.