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Lj2g3v1988880.1

Overview

Field Value
Gene ID Lj2g3v1988880
Transcript ID Lj2g3v1988880.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: casein kinase II subunit beta-like isoform X1 [Cicer arietinum] gi|502160448|ref|XP_004511748.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 96 96 – –
PANTHER
PTHR11740:SF4
1 286 286 5.40E-220 –
PANTHER
PTHR11740
1 286 286 5.40E-220
IPR000704
Gene3D
G3DSA:1.10.1820.10
94 197 104 2.20E-48
IPR016149
SUPERFAMILY
SSF57798
97 285 189 1.01E-82
IPR000704
PRINTS
PR00472
99 115 17 4.00E-66
IPR000704
SMART
SM01085
99 282 184 3.80E-130
IPR000704
Pfam
PF01214
99 282 184 1.10E-82
IPR000704
PRINTS
PR00472
116 130 15 4.00E-66
IPR000704
PRINTS
PR00472
171 192 22 4.00E-66
IPR000704
PRINTS
PR00472
196 217 22 4.00E-66
IPR000704
Gene3D
G3DSA:2.20.25.20
198 270 73 2.40E-37
IPR016150
ProSitePatterns
PS01101
200 231 32 –
IPR000704
PRINTS
PR00472
218 239 22 4.00E-66
IPR000704
PRINTS
PR00472
246 263 18 4.00E-66
IPR000704

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005956
Cellular component Protein kinase CK2 complex A protein complex that possesses protein serine/threonine kinase activity, and contains two catalytic alpha subunits and two regulatory beta subunits. Protein kinase CK2 complexes are found in nearly every subcellular compartment, and can phosphorylate many protein substrates in addition to casein.
Subterm of
GO:0019887
Molecular function Protein kinase regulator activity Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj2g3v1988880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1988880.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.