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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000704
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.673s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1988880.1
n.a. PREDICTED: casein kinase II subunit beta-like isoform X1 [Cicer arietinum] gi|502160448|ref|XP_004511748.1| chr2 29614482 29617753 -
7 domain predictions
2 GO terms
Lj2g3v1988880.2
n.a. PREDICTED: casein kinase II subunit beta-like isoform X2 [Cicer arietinum] gi|502160451|ref|XP_004511749.1| chr2 29614482 29617753 -
7 domain predictions
2 GO terms
Lj4g3v1202120.1
n.a. PREDICTED: casein kinase II subunit beta-like isoform X1 [Cicer arietinum] gi|502152538|ref|XP_004508972.1| chr4 17718743 17722509 -
7 domain predictions
2 GO terms
Lj4g3v1202120.2
n.a. PREDICTED: casein kinase II subunit beta-like isoform X2 [Cicer arietinum] gi|502152540|ref|XP_004508973.1| chr4 17718743 17722509 -
7 domain predictions
2 GO terms
LotjaGi2g1v0418400.1
n.a. Casein kinase II subunit beta; TAIR: AT5G47080.1 casein kinase II beta chain 1; Swiss-Prot: sp|P40228|CSK2B_ARATH Casein kinase II subunit beta-1; TrEMBL-Plants: tr|V7CEG3|V7CEG3_PHAVU Casein kinase II subunit beta; Found in the gene: LotjaGi2g1v0418400 LjG1.1_chr2 91672139 91676552 -
6 domain predictions
2 GO terms
LotjaGi2g1v0418400.2
n.a. Casein kinase II subunit beta; TAIR: AT4G17640.1 casein kinase II beta chain 2; Swiss-Prot: sp|P40229|CSK2C_ARATH Casein kinase II subunit beta-2; TrEMBL-Plants: tr|I1LGW0|I1LGW0_SOYBN Casein kinase II subunit beta; Found in the gene: LotjaGi2g1v0418400 LjG1.1_chr2 91673403 91675949 -
6 domain predictions
2 GO terms
LotjaGi4g1v0193800.1
n.a. Casein kinase II subunit beta; TAIR: AT4G17640.1 casein kinase II beta chain 2; Swiss-Prot: sp|P40228|CSK2B_ARATH Casein kinase II subunit beta-1; TrEMBL-Plants: tr|I3S081|I3S081_LOTJA Casein kinase II subunit beta; Found in the gene: LotjaGi4g1v0193800 LjG1.1_chr4 44636081 44641091 -
6 domain predictions
2 GO terms
LotjaGi4g1v0193800.2
n.a. Casein kinase II subunit beta; TAIR: AT5G47080.4 casein kinase II beta chain 1; Swiss-Prot: sp|P40228|CSK2B_ARATH Casein kinase II subunit beta-1; TrEMBL-Plants: tr|I3S081|I3S081_LOTJA Casein kinase II subunit beta; Found in the gene: LotjaGi4g1v0193800 LjG1.1_chr4 44636081 44641091 -
6 domain predictions
2 GO terms
LotjaGi4g1v0193800.3
n.a. Casein kinase II subunit beta; TAIR: AT4G17640.1 casein kinase II beta chain 2; Swiss-Prot: sp|P40229|CSK2C_ARATH Casein kinase II subunit beta-2; TrEMBL-Plants: tr|I3S081|I3S081_LOTJA Casein kinase II subunit beta; Found in the gene: LotjaGi4g1v0193800 LjG1.1_chr4 44637796 44640691 -
6 domain predictions
2 GO terms
LotjaGi4g1v0193800.4
n.a. Casein kinase II subunit beta; TAIR: AT4G17640.1 casein kinase II beta chain 2; Swiss-Prot: sp|P40229|CSK2C_ARATH Casein kinase II subunit beta-2; TrEMBL-Plants: tr|I3S081|I3S081_LOTJA Casein kinase II subunit beta; Found in the gene: LotjaGi4g1v0193800 LjG1.1_chr4 44637796 44640706 -
6 domain predictions
2 GO terms