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Lj2g3v2017360.1

Overview

Field Value
Gene ID Lj2g3v2017360
Transcript ID Lj2g3v2017360.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein IQ-DOMAIN 14-like [Cicer arietinum] gi|502176135|ref|XP_004515805.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32295:SF13
1 217 217 1.00E-80 –
MobiDBLite
mobidb-lite
1 33 33 – –
PANTHER
PTHR32295
1 217 217 1.00E-80 –
SMART
SM00015
89 111 23 0.0065
IPR000048
ProSiteProfiles
PS50096
90 118 29 9.853
IPR000048
SUPERFAMILY
SSF52540
90 138 49 3.45E-05
IPR027417
Pfam
PF00612
92 111 20 4.10E-06
IPR000048
SMART
SM00015
112 133 22 58
IPR000048
ProSiteProfiles
PS50096
114 141 28 8.938
IPR000048
Pfam
PF00612
117 132 16 0.043
IPR000048
MobiDBLite
mobidb-lite
171 197 27 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj2g3v2017360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2017360.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.