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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2183310 |
| Transcript ID | Lj2g3v2183310.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: autophagy-related protein 13-like [Cicer arietinum] gi|502178443|ref|XP_004516254.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 430 | 430 | 5.50E-212 | – | |
| PANTHER | 1 | 430 | 430 | 5.50E-212 | – | |
| Pfam | 19 | 101 | 83 | 1.60E-10 | ||
| Pfam | 101 | 214 | 114 | 4.70E-22 | ||
| MobiDBLite | 329 | 360 | 32 | – | – | |
| MobiDBLite | 372 | 423 | 52 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Autophagy | The cellular catabolic process in which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation. | ||
| Cellular component | Atg1/ULK1 kinase complex | A protein complex consisting of Atg1 (or Atg1 homologs e.g. ULK1, ULK2 in mammals) and Atg13 along with other proteins that regulate its function (e.g. Atg17 in yeast or RB1CC1(FIP200) in mammals). This complex has serine/threonine protein kinase activity and is involved in autophagosome formation. |
Expression pattern of Lj2g3v2183310.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2183310.1, powered by CORGI.
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