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PF10033

Source: Pfam

Description

Autophagy-related protein 13

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006914
Biological process Autophagy The cellular catabolic process in which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation.
Subterm of
GO:1990316
Cellular component Atg1/ULK1 kinase complex A protein complex consisting of Atg1 (or Atg1 homologs e.g. ULK1, ULK2 in mammals) and Atg13 along with other proteins that regulate its function (e.g. Atg17 in yeast or RB1CC1(FIP200) in mammals). This complex has serine/threonine protein kinase activity and is involved in autophagosome formation.
Subterm of

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj0g3v0198449.1
– Autophagy-related protein [Medicago truncatula] gi|357519853|ref|XP_003630215.1|
Domains
4
Lj1g3v1287010.1
– Autophagy-related protein [Medicago truncatula] gi|357464537|ref|XP_003602550.1|
Domains
4
Lj1g3v1287010.2
– Autophagy-related protein [Medicago truncatula] gi|357464537|ref|XP_003602550.1|
Domains
4
Lj1g3v1290470.1
– Autophagy-related protein [Medicago truncatula] gi|357519853|ref|XP_003630215.1|
Domains
4
Lj2g3v2183310.1
– PREDICTED: autophagy-related protein 13-like [Cicer arietinum] gi|502178443|ref|XP_004516254.1|
Domains
5
LotjaGi1g1v0128300.1
– Autophagy-related protein 13; TAIR: AT3G49590.1 Autophagy-related protein 13; Swiss-Prot: sp|Q9SCK0|AT13A_ARATH Autophagy-related protein 13a; TrEMBL-Plants: tr|A0A0B2RZV3|A0A0B2RZV3_GLYSO Autophagy-related protein 13; Found in the gene: LotjaGi1g1v0128300
Domains
8
LotjaGi1g1v0128300.2
– Autophagy-related protein 13; TAIR: AT3G49590.1 Autophagy-related protein 13; Swiss-Prot: sp|Q9SCK0|AT13A_ARATH Autophagy-related protein 13a; TrEMBL-Plants: tr|A0A0B2RZV3|A0A0B2RZV3_GLYSO Autophagy-related protein 13; Found in the gene: LotjaGi1g1v0128300
Domains
8
LotjaGi1g1v0316300.1
– Autophagy-related protein 13; TAIR: AT3G18770.1 Autophagy-related protein 13; Swiss-Prot: sp|F4J8V5|AT13B_ARATH Autophagy-related protein 13b; TrEMBL-Plants: tr|A0A1J7IGP6|A0A1J7IGP6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0316300
Domains
8
LotjaGi4g1v0407500.1
– Autophagy-related protein 13; TAIR: AT3G18770.1 Autophagy-related protein 13; Swiss-Prot: sp|F4J8V5|AT13B_ARATH Autophagy-related protein 13b; TrEMBL-Plants: tr|G7LD52|G7LD52_MEDTR Autophagy-related protein; Found in the gene: LotjaGi4g1v0407500
Domains
6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 11.11