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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2772300 |
| Transcript ID | Lj2g3v2772300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cicer arietinum] gi|502111977|ref|XP_004494212.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 12 | 37 | 26 | – | – | |
| TMHMM | 15 | 37 | 23 | – | – | |
| PANTHER | 16 | 134 | 119 | 3.70E-57 | ||
| Pfam | 17 | 128 | 112 | 6.20E-33 | ||
| Phobius | 38 | 48 | 11 | – | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| Phobius | 49 | 68 | 20 | – | – | |
| Phobius | 69 | 79 | 11 | – | – | |
| Phobius | 80 | 97 | 18 | – | – | |
| TMHMM | 81 | 100 | 20 | – | – | |
| Phobius | 98 | 108 | 11 | – | – | |
| TMHMM | 107 | 129 | 23 | – | – | |
| Phobius | 109 | 128 | 20 | – | – | |
| Phobius | 129 | 134 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v2772300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2772300.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.