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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3022780 |
| Transcript ID | Lj2g3v3022780.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Methylenetetrahydrofolate reductase isoform 4 [Theobroma cacao] gi|508713258|gb|EOY05155.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | – | – | |
| CDD | 1 | 173 | 173 | 3.97E-59 | ||
| Phobius | 1 | 10 | 10 | – | – | |
| Gene3D | 2 | 173 | 172 | 1.30E-60 | ||
| Pfam | 2 | 173 | 172 | 2.90E-59 | ||
| SUPERFAMILY | 4 | 173 | 170 | 2.75E-47 | ||
| Phobius | 11 | 19 | 9 | – | – | |
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 173 | 149 | – | – | |
| PANTHER | 93 | 111 | 19 | 4.20E-22 | – | |
| PANTHER | 93 | 111 | 19 | 4.20E-22 | – | |
| PANTHER | 142 | 173 | 32 | 4.20E-22 | – | |
| PANTHER | 142 | 173 | 32 | 4.20E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methylenetetrahydrofolate reductase (NAD(P)H) activity | Catalysis of the reaction: 5-methyltetrahydrofolate + NAD(P)+ = 5,10-methylenetetrahydrofolate + NAD(P)H + H+. | ||
| Biological process | Methionine metabolic process | The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj2g3v3022780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3022780.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.