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Lj2g3v3339360.1

Overview

Field Value
Gene ID Lj2g3v3339360
Transcript ID Lj2g3v3339360.1
Lotus japonicus genome version MG20 v3.0
Description polyketide reductase [Lotus japonicus] gi|121309832|dbj|BAF44219.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11732:SF220
7 123 117 2.60E-177 –
PANTHER
PTHR11732
7 123 117 2.60E-177
IPR001395
PIRSF
PIRSF000097
8 285 278 1.00E-80
IPR020471
CDD
cd06660
9 285 277 2.20E-82
IPR023210
Gene3D
G3DSA:3.20.20.100
15 285 271 1.40E-93
IPR023210
SUPERFAMILY
SSF51430
15 285 271 1.11E-80
IPR023210
Pfam
PF00248
32 285 254 5.80E-47
IPR023210
PRINTS
PR00069
45 69 25 3.80E-54
IPR020471
ProSitePatterns
PS00798
49 66 18 –
IPR018170
PRINTS
PR00069
105 123 19 3.80E-54
IPR020471
PANTHER
PTHR11732:SF220
140 285 146 2.60E-177 –
PANTHER
PTHR11732
140 285 146 2.60E-177
IPR001395
PRINTS
PR00069
152 169 18 3.80E-54
IPR020471
ProSitePatterns
PS00062
152 169 18 –
IPR018170
PRINTS
PR00069
186 215 30 3.80E-54
IPR020471
PRINTS
PR00069
229 253 25 3.80E-54
IPR020471

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj2g3v3339360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v3339360.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.