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Lj3g3v0030630.1

Overview

Field Value
Gene ID Lj3g3v0030630
Transcript ID Lj3g3v0030630.1
Lotus japonicus genome version MG20 v3.0
Description BHLH transcription factor [Medicago truncatula] gi|357455385|ref|XP_003597973.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23042
53 236 184 2.40E-85 –
PANTHER
PTHR23042:SF57
53 236 184 2.40E-85 –
ProSiteProfiles
PS50888
60 109 50 15.123
IPR011598
Gene3D
G3DSA:4.10.280.10
64 125 62 1.20E-16
IPR011598
CDD
cd00083
65 114 50 3.26E-11 –
Pfam
PF00010
65 110 46 1.20E-10
IPR011598
SUPERFAMILY
SSF47459
65 122 58 3.01E-16
IPR011598
SMART
SM00353
66 115 50 1.90E-13
IPR011598
Coils
Coil
99 126 28 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj3g3v0030630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0030630.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.