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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0030690 |
| Transcript ID | Lj3g3v0030690.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like [Cicer arietinum] gi|502080649|ref|XP_004486632.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | – | – | |
| PANTHER | 1 | 332 | 332 | 0 | – | |
| PANTHER | 1 | 332 | 332 | 0 | – | |
| Pfam | 20 | 99 | 80 | 8.80E-37 | ||
| MobiDBLite | 100 | 169 | 70 | – | – | |
| MobiDBLite | 201 | 224 | 24 | – | – | |
| Coils | 229 | 260 | 32 | – | – | |
| MobiDBLite | 269 | 350 | 82 | – | – | |
| Coils | 377 | 407 | 31 | – | – | |
| MobiDBLite | 405 | 488 | 84 | – | – | |
| MobiDBLite | 522 | 551 | 30 | – | – | |
| PANTHER | 629 | 1318 | 690 | 0 | – | |
| PANTHER | 629 | 1318 | 690 | 0 | – | |
| MobiDBLite | 645 | 678 | 34 | – | – | |
| MobiDBLite | 706 | 801 | 96 | – | – | |
| Coils | 791 | 843 | 53 | – | – | |
| MobiDBLite | 883 | 971 | 89 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transcription coregulator activity | A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to either activate or repress the transcription of specific genes. Coregulators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class modulates interactions of DNA-binding transcription factor with other transcription coregulators. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj3g3v0030690.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0030690.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.