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GO:0003712

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description Transcription coregulator activity
Full defintion A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to either activate or repress the transcription of specific genes. Coregulators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class modulates interactions of DNA-binding transcription factor with other transcription coregulators.
Subterm of

Relationships

The relationship of GO:0003712 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCtxnOH-2018
WikipediaTranscription_coregulator
PMID
Genesis of chromatin and transcription dynamics in the origin of species.Koster MJ, Snel B, Timmers HT
Cell. 2015 May 7; 161 (4): 724–36.PMID: 25957681

Histone proteins compact and stabilize the genomes of Eukarya and Archaea. By forming nucleosome(-like) structures they restrict access of DNA-binding transcription regulators to cis-regulatory DNA elements. Dynamic competition between histones and transcription factors is facilitated by different classes of proteins including ATP-dependent remodeling enzymes that control assembly, access, and editing of chromatin. Here, we summarize the knowledge on dynamics underlying transcriptional regulation across the domains of life with a focus on ATP-dependent enzymes in chromatin structure or in TATA-binding protein activity. These insights suggest directions for future studies on the evolution of transcription regulation and chromatin dynamics.

Associated Lotus transcripts 92

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0216379.1
– Histone acetyltransferase [Medicago truncatula] gi|357466361|ref|XP_003603465.1|
GO terms
5
Lj0g3v0270249.1
– PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like [Cicer arietinum] gi|502089455|ref|XP_004488916.1|
GO terms
5
Lj0g3v0301409.2
– PREDICTED: mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Cicer arietinum] gi|502134665|ref|XP_004502200.1|
GO terms
3
Lj1g3v3716940.1
– Mediator of RNA polymerase II transcription subunit [Medicago truncatula] gi|357451207|ref|XP_003595880.1|
GO terms
3
Lj1g3v4983080.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 14-like isoform X2 [Cicer arietinum] gi|502113601|ref|XP_004494701.1|
GO terms
3
Lj2g3v1968190.1
– Speckle-type POZ protein-like B [Medicago truncatula] gi|357482619|ref|XP_003611596.1|
GO terms
5
Lj2g3v2905010.1
– CM0545.310.nc [Lotus japonicus] gi|164605534|dbj|BAF98600.1|
GO terms
3
Lj2g3v2905010.2
– CM0545.310.nc [Lotus japonicus] gi|164605534|dbj|BAF98600.1|
GO terms
3
Lj3g3v0030690.1
– CTV.22 [Citrus trifoliata] gi|24461867|gb|AAN62354.1|AF506028_23
GO terms
2
Lj3g3v0030690.2
– PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like [Cicer arietinum] gi|502080649|ref|XP_004486632.1|
GO terms
2
Lj3g3v1487120.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 4-like isoform X1 [Cicer arietinum] gi|502146174|ref|XP_004506336.1|
GO terms
3
Lj3g3v2320530.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 6-like isoform X1 [Cicer arietinum] gi|502156142|ref|XP_004510328.1|
GO terms
3
Lj3g3v2330860.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 12-like [Cicer arietinum] gi|502157177|ref|XP_004510784.1|
GO terms
3
Lj3g3v2576290.1
– Protein FAM48A, partial [Caragana korshinskii] gi|480328083|gb|AGJ83743.1|
GO terms
2
Lj3g3v2576290.2
– Protein FAM48A, partial [Caragana korshinskii] gi|480328083|gb|AGJ83743.1|
GO terms
2
Lj3g3v2692910.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 9-like [Cicer arietinum] gi|502156250|ref|XP_004510381.1|
GO terms
3
Lj4g3v0756970.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like [Cicer arietinum] gi|502087334|ref|XP_004488501.1|
GO terms
3
Lj4g3v1037660.1
–
GO terms
3
Lj4g3v1037670.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 4-like isoform X1 [Cicer arietinum] gi|502146174|ref|XP_004506336.1|
GO terms
3
Lj4g3v1399920.1
– BTB/POZ domain-containing protein [Lotus japonicus] gi|283132373|dbj|BAI63592.1|
GO terms
5
Lj4g3v1881330.1
– Uncharacterized protein TCM_038116 [Theobroma cacao] gi|508783856|gb|EOY31112.1|
GO terms
2
Lj4g3v2180380.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like [Cicer arietinum] gi|502150507|ref|XP_004507987.1|
GO terms
3
Lj4g3v2436020.1
– CRY [Pisum sativum] gi|113206404|gb|ABI34432.1|
GO terms
2
Lj4g3v2603860.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like isoform X2 [Cicer arietinum] gi|502140788|ref|XP_004504338.1|
GO terms
3
Lj5g3v0614970.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 4-like isoform X1 [Cicer arietinum] gi|502146174|ref|XP_004506336.1|
GO terms
3
Lj5g3v2045000.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 31-like [Glycine max] gi|356575895|ref|XP_003556072.1|
GO terms
3
Lj6g3v0433880.1
– DELLA protein [Phaseolus vulgaris] gi|148189864|dbj|BAF62637.1|
GO terms
2
Lj6g3v1786800.1
– PREDICTED: mediator of RNA polymerase II transcription subunit 11-like isoform X1 [Cicer arietinum] gi|502126197|ref|XP_004499215.1|
GO terms
3
LotjaGi1g1v0061300.1
– Mediator of RNA polymerase II transcription subunit 7; TAIR: AT5G03500.1 Mediator complex, subunit Med7; Swiss-Prot: sp|Q9LZD7|MED7B_ARATH Mediator of RNA polymerase II transcription subunit 7b; TrEMBL-Plants: tr|B0BLB1|B0BLB1_LOTJA CM0545.310.nc protein; Found in the gene: LotjaGi1g1v0061300
GO terms
3
LotjaGi1g1v0061300.2
– Mediator of RNA polymerase II transcription subunit 7; TAIR: AT5G03500.1 Mediator complex, subunit Med7; Swiss-Prot: sp|Q9LZD7|MED7B_ARATH Mediator of RNA polymerase II transcription subunit 7b; TrEMBL-Plants: tr|B0BLB1|B0BLB1_LOTJA CM0545.310.nc protein; Found in the gene: LotjaGi1g1v0061300
GO terms
3
LotjaGi1g1v0061300.3
– Mediator of RNA polymerase II transcription subunit 7; TAIR: AT5G03500.1 Mediator complex, subunit Med7; Swiss-Prot: sp|Q9LZD7|MED7B_ARATH Mediator of RNA polymerase II transcription subunit 7b; TrEMBL-Plants: tr|B0BLB1|B0BLB1_LOTJA CM0545.310.nc protein; Found in the gene: LotjaGi1g1v0061300
GO terms
3
LotjaGi1g1v0476500.1
– Mediator of rna polymerase ii transcription subunit 12; TAIR: AT4G00450.1 RNA polymerase II transcription mediator; Swiss-Prot: sp|H3K2Y6|MED12_ARATH Mediator of RNA polymerase II transcription subunit 12; TrEMBL-Plants: tr|K7MU97|K7MU97_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0476500
GO terms
3
LotjaGi1g1v0676500.1
– Protein TERMINAL FLOWER 1; TAIR: AT2G27550.1 centroradiali; Swiss-Prot: sp|Q9ZNV5|CEN_ARATH Protein CENTRORADIALIS-like; TrEMBL-Plants: tr|Q6TDS5|Q6TDS5_LOTJA CEN/TFL1-like GTP-associated binding protein; Found in the gene: LotjaGi1g1v0676500
GO terms
2
LotjaGi1g1v0781700.1
– Mediator of RNA polymerase II transcription subunit 14; TAIR: AT3G04740.1 RNA polymerase II transcription mediator; Swiss-Prot: sp|Q9SR02|MED14_ARATH Mediator of RNA polymerase II transcription subunit 14; TrEMBL-Plants: tr|V7BRH7|V7BRH7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0781700
GO terms
3
LotjaGi1g1v0781700.2
– Mediator of RNA polymerase II transcription subunit 14; TAIR: AT3G04740.1 RNA polymerase II transcription mediator; Swiss-Prot: sp|Q9SR02|MED14_ARATH Mediator of RNA polymerase II transcription subunit 14; TrEMBL-Plants: tr|V7BRH7|V7BRH7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0781700
GO terms
3
LotjaGi2g1v0408600.1
– BTB/POZ and TAZ domain protein; TAIR: AT5G67480.1 BTB and TAZ domain protein 4; Swiss-Prot: sp|Q9FJX5|BT4_ARATH BTB/POZ and TAZ domain-containing protein 4; TrEMBL-Plants: tr|I3TAA7|I3TAA7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0408600
GO terms
5
LotjaGi2g1v0408600.2
– BTB/POZ and TAZ domain protein; TAIR: AT5G67480.1 BTB and TAZ domain protein 4; Swiss-Prot: sp|Q9FJX5|BT4_ARATH BTB/POZ and TAZ domain-containing protein 4; TrEMBL-Plants: tr|I3TAA7|I3TAA7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0408600
GO terms
5
LotjaGi2g1v0449200.1
– Mediator of RNA polymerase II transcription subunit 22; TAIR: AT1G16430.1 Surfeit locus protein 5 subunit 22 of Mediator complex; Swiss-Prot: sp|Q9SA42|MD22A_ARATH Mediator of RNA polymerase II transcription subunit 22a; TrEMBL-Plants: tr|A0A1J7HSH7|A0A1J7HSH7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0449200
GO terms
3
LotjaGi3g1v0006200.1
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200
GO terms
2
LotjaGi3g1v0006200.2
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200
GO terms
2
LotjaGi3g1v0006200.3
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200
GO terms
2
LotjaGi3g1v0006200.4
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.3 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200
GO terms
2
LotjaGi3g1v0006200.5
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200
GO terms
2
LotjaGi3g1v0006200.6
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.1 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|G7IM96|G7IM96_MEDTR Transcription cofactor, putative; Found in the gene: LotjaGi3g1v0006200
GO terms
2
LotjaGi3g1v0006200.7
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.1 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200
GO terms
2
LotjaGi3g1v0300100.1
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi3g1v0300100
GO terms
3
LotjaGi3g1v0300100.2
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi3g1v0300100
GO terms
3
LotjaGi3g1v0300100.3
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi3g1v0300100
GO terms
3
LotjaGi3g1v0312400_LC.1
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.1 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|K7M0K0|K7M0K0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0312400_LC
GO terms
2
LotjaGi3g1v0338000.1
– Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000
GO terms
5
LotjaGi3g1v0338000.2
– Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000
GO terms
5
LotjaGi3g1v0338000.3
– Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000
GO terms
5
LotjaGi3g1v0338000.4
– Histone acetyltransferase; TAIR: AT1G16710.4 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|K7KYS1|K7KYS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000
GO terms
5
LotjaGi3g1v0338000.5
– Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000
GO terms
5
LotjaGi3g1v0353400.1
– Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.1 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|K7L7Z4|K7L7Z4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0353400
GO terms
2
LotjaGi3g1v0373100.1
– Mediator of RNA polymerase II transcription subunit 6; TAIR: AT3G21350.1 RNA polymerase transcriptional regulation mediator-like protein; Swiss-Prot: sp|F4IXJ7|MED6_ARATH Mediator of RNA polymerase II transcription subunit 6; TrEMBL-Plants: tr|A0A0S3T0L5|A0A0S3T0L5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0373100
GO terms
3
LotjaGi3g1v0373100.2
– Mediator of RNA polymerase II transcription subunit 6; TAIR: AT3G21350.1 RNA polymerase transcriptional regulation mediator-like protein; Swiss-Prot: sp|F4IXJ7|MED6_ARATH Mediator of RNA polymerase II transcription subunit 6; TrEMBL-Plants: tr|V7AQK7|V7AQK7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0373100
GO terms
3
LotjaGi3g1v0383600.1
– Mediator of rna polymerase ii transcription subunit 12; TAIR: AT4G00450.1 RNA polymerase II transcription mediator; Swiss-Prot: sp|H3K2Y6|MED12_ARATH Mediator of RNA polymerase II transcription subunit 12; TrEMBL-Plants: tr|K7KC24|K7KC24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0383600
GO terms
3
LotjaGi3g1v0392200.1
– Mediator of RNA polymerase II transcription subunit; TAIR: AT5G12230.1 mediator of RNA polymerase II transcription subunit 19a-like protein; Swiss-Prot: sp|Q9FMP0|MD19A_ARATH Mediator of RNA polymerase II transcription subunit 19a; TrEMBL-Plants: tr|V7ANR4|V7ANR4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0392200
GO terms
3
LotjaGi3g1v0411400.1
– Transcription factor Spt20; TAIR: AT1G72390.1 nuclear receptor coactivator; Swiss-Prot: sp|Q8NEM7|SP20H_HUMAN Transcription factor SPT20 homolog; TrEMBL-Plants: tr|K7MEJ0|K7MEJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0411400
GO terms
2
LotjaGi3g1v0503000.1
– Mediator of RNA polymerase II transcription subunit; TAIR: AT5G19480.1 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q6NQD9|MD19B_ARATH Probable mediator of RNA polymerase II transcription subunit 19b; TrEMBL-Plants: tr|A0A0B2PXI8|A0A0B2PXI8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0503000
GO terms
3
LotjaGi4g1v0009200.1
– Mediator of RNA polymerase II transcription subunit 11; TAIR: AT3G01435.1 Expressed protein; Swiss-Prot: sp|Q6ID77|MED11_ARATH Mediator of RNA polymerase II transcription subunit 11; TrEMBL-Plants: tr|I3RZN2|I3RZN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0009200
GO terms
3
LotjaGi4g1v0009200.2
– Mediator of RNA polymerase II transcription subunit 11; TAIR: AT3G01435.1 Expressed protein; Swiss-Prot: sp|Q6ID77|MED11_ARATH Mediator of RNA polymerase II transcription subunit 11; TrEMBL-Plants: tr|I3RZN2|I3RZN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0009200
GO terms
3
LotjaGi4g1v0094500.1
– Mediator of RNA polymerase II transcription subunit 10; TAIR: AT1G26665.1 Mediator complex, subunit Med10; Swiss-Prot: sp|F4HPA7|MD10B_ARATH Mediator of RNA polymerase II transcription subunit 10b; TrEMBL-Plants: tr|I3SQ83|I3SQ83_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0094500
GO terms
3
LotjaGi4g1v0128200.1
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi4g1v0128200
GO terms
3
LotjaGi4g1v0128200.2
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi4g1v0128200
GO terms
3
LotjaGi4g1v0225900.1
– BTB/POZ and TAZ domain protein; TAIR: AT3G48360.1 BTB and TAZ domain protein 2; Swiss-Prot: sp|Q94BN0|BT2_ARATH BTB/POZ and TAZ domain-containing protein 2; TrEMBL-Plants: tr|D2KTV8|D2KTV8_LOTJA BTB/POZ domain-containing protein; Found in the gene: LotjaGi4g1v0225900
GO terms
5
LotjaGi4g1v0269500.1
– RNA polymerase II transcription mediator; TAIR: AT5G20170.1 RNA polymerase II transcription mediator; Swiss-Prot: sp|F4K460|MED17_ARATH Mediator of RNA polymerase II transcription subunit 17; TrEMBL-Plants: tr|K7KNJ6|K7KNJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0269500
GO terms
3
LotjaGi4g1v0273400.2
– Histone acetyltransferase; TAIR: AT3G24150.1 hypothetical protein; Swiss-Prot: sp|Q12TC8|DNAA_SHEDO Chromosomal replication initiator protein DnaA; TrEMBL-Plants: tr|I1LZP3|I1LZP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0273400
GO terms
2
LotjaGi4g1v0326300.1
– Mediator of RNA polymerase II transcription subunit; TAIR: AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex; Swiss-Prot: sp|Q6NPF4|MD20A_ARATH Mediator of RNA polymerase II transcription subunit 20a; TrEMBL-Plants: tr|I3T3B9|I3T3B9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0326300
GO terms
3
LotjaGi4g1v0359300.1
– GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q5BN23|RGA1_BRACM DELLA protein RGA1; TrEMBL-Plants: tr|B2BA71|B2BA71_PEA CRY; Found in the gene: LotjaGi4g1v0359300
GO terms
2
LotjaGi4g1v0369400.1
– Mediator of RNA polymerase II transcription subunit 18; TAIR: AT2G22370.1 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SJZ6|MED18_ARATH Mediator of RNA polymerase II transcription subunit 18; TrEMBL-Plants: tr|A0A0S3T1D1|A0A0S3T1D1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0369400
GO terms
3
LotjaGi4g1v0374100.1
– Mediator of RNA polymerase II transcription subunit 10; TAIR: AT1G26665.1 Mediator complex, subunit Med10; Swiss-Prot: sp|F4HPA7|MD10B_ARATH Mediator of RNA polymerase II transcription subunit 10b; TrEMBL-Plants: tr|C6TKB8|C6TKB8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0374100
GO terms
3
LotjaGi4g1v0374100.2
– Mediator of RNA polymerase II transcription subunit 10; TAIR: AT1G26665.1 Mediator complex, subunit Med10; Swiss-Prot: sp|F4HPA7|MD10B_ARATH Mediator of RNA polymerase II transcription subunit 10b; TrEMBL-Plants: tr|C6TKB8|C6TKB8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0374100
GO terms
3
LotjaGi5g1v0070200.1
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi5g1v0070200
GO terms
3
LotjaGi5g1v0070200.2
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi5g1v0070200
GO terms
3
LotjaGi5g1v0070200.3
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi5g1v0070200
GO terms
3
LotjaGi5g1v0070200.4
– Mediator of RNA polymerase II transcription subunit 4; TAIR: AT5G02850.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9LZ00|MED4_ARATH Mediator of RNA polymerase II transcription subunit 4; TrEMBL-Plants: tr|G7LC42|G7LC42_MEDTR Vitamin-D-receptor interacting mediator subunit 4; Found in the gene: LotjaGi5g1v0070200
GO terms
3
LotjaGi5g1v0202100.1
– Histone acetyltransferase; TAIR: AT1G79000.2 histone acetyltransferase of the CBP family 1; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|G7J5R6|G7J5R6_MEDTR Histone acetylation protein; Found in the gene: LotjaGi5g1v0202100
GO terms
5
LotjaGi5g1v0202300_LC.1
– Histone acetyltransferase; TAIR: AT1G16710.1 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|G7JBQ0|G7JBQ0_MEDTR Histone acetylation protein; Found in the gene: LotjaGi5g1v0202300_LC
GO terms
5
LotjaGi5g1v0261400.1
– Mediator of RNA polymerase II transcription subunit 11; TAIR: AT3G01435.1 Expressed protein; Swiss-Prot: sp|Q6ID77|MED11_ARATH Mediator of RNA polymerase II transcription subunit 11; TrEMBL-Plants: tr|I3RZN2|I3RZN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0261400
GO terms
3
LotjaGi5g1v0261400.2
– Mediator of RNA polymerase II transcription subunit 11; TAIR: AT3G01435.1 Expressed protein; Swiss-Prot: sp|Q6ID77|MED11_ARATH Mediator of RNA polymerase II transcription subunit 11; TrEMBL-Plants: tr|I3RZN2|I3RZN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0261400
GO terms
3
LotjaGi5g1v0308800.1
– Mediator of RNA polymerase II transcription subunit 31; TAIR: AT5G19910.1 SOH1 family protein; Swiss-Prot: sp|Q8VYB1|MED31_ARATH Mediator of RNA polymerase II transcription subunit 31; TrEMBL-Plants: tr|I3S5R5|I3S5R5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0308800
GO terms
3
LotjaGi5g1v0308800.2
– Mediator of RNA polymerase II transcription subunit 31; TAIR: AT5G19910.1 SOH1 family protein; Swiss-Prot: sp|Q8VYB1|MED31_ARATH Mediator of RNA polymerase II transcription subunit 31; TrEMBL-Plants: tr|I3S5R5|I3S5R5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0308800
GO terms
3
LotjaGi5g1v0308800.3
– Mediator of RNA polymerase II transcription subunit 31; TAIR: AT5G19910.1 SOH1 family protein; Swiss-Prot: sp|Q8VYB1|MED31_ARATH Mediator of RNA polymerase II transcription subunit 31; TrEMBL-Plants: tr|I3S5R5|I3S5R5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0308800
GO terms
3
LotjaGi6g1v0031200.1
– Mediator of RNA polymerase II transcription subunit 13 like; TAIR: AT1G55325.2 RNA polymerase II transcription mediator; Swiss-Prot: sp|F4I096|MED13_ARATH Mediator of RNA polymerase II transcription subunit 13; TrEMBL-Plants: tr|A0A0R0HVT6|A0A0R0HVT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0031200
GO terms
3
LotjaGi6g1v0031200.2
– Mediator of RNA polymerase II transcription subunit 13 like; TAIR: AT1G55325.3 RNA polymerase II transcription mediator; Swiss-Prot: sp|F4I096|MED13_ARATH Mediator of RNA polymerase II transcription subunit 13; TrEMBL-Plants: tr|K7K0Q7|K7K0Q7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0031200
GO terms
3
LotjaGi6g1v0031200.3
– Mediator of RNA polymerase II transcription subunit 13 like; TAIR: AT1G55325.3 RNA polymerase II transcription mediator; Swiss-Prot: sp|F4I096|MED13_ARATH Mediator of RNA polymerase II transcription subunit 13; TrEMBL-Plants: tr|A0A0R0HVT6|A0A0R0HVT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0031200
GO terms
3
LotjaGi6g1v0058600.1
– GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600
GO terms
2
LotjaGi6g1v0058600.2
– GAI-like protein 1; TAIR: AT2G01570.1 GRAS family transcription factor family protein; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600
GO terms
2
LotjaGi6g1v0058600.3
– GAI-like protein 1; TAIR: AT3G03450.1 RGA-like 2; Swiss-Prot: sp|Q84TQ7|GAI_GOSHI DELLA protein GAI; TrEMBL-Plants: tr|A0A0L9U8W1|A0A0L9U8W1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0058600
GO terms
2
LotjaGi6g1v0288000.1
– Mediator of RNA polymerase II transcription subunit 11; TAIR: AT3G01435.1 Expressed protein; Swiss-Prot: sp|Q6ID77|MED11_ARATH Mediator of RNA polymerase II transcription subunit 11; TrEMBL-Plants: tr|C6SYN4|C6SYN4_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0288000
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0016592
Cellular component Mediator complex 1 1.09