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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0309020 |
| Transcript ID | Lj3g3v0309020.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max] gi|356550442|ref|XP_003543596.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 2 | 65 | 64 | 1.25E-37 | ||
| PANTHER | 2 | 321 | 320 | 1.90E-190 | – | |
| PANTHER | 2 | 321 | 320 | 1.90E-190 | – | |
| Gene3D | 2 | 63 | 62 | 1.30E-41 | ||
| SMART | 21 | 61 | 41 | 0.047 | ||
| Pfam | 26 | 61 | 36 | 0.013 | ||
| MobiDBLite | 72 | 105 | 34 | – | – | |
| SUPERFAMILY | 96 | 300 | 205 | 1.25E-37 | ||
| Gene3D | 98 | 319 | 222 | 1.30E-41 | ||
| SMART | 98 | 138 | 41 | 7.10E-05 | ||
| ProSiteProfiles | 105 | 241 | 137 | 20.619 | ||
| ProSiteProfiles | 105 | 147 | 43 | 10.241 | ||
| SMART | 142 | 183 | 42 | 5.90E-06 | ||
| ProSiteProfiles | 150 | 183 | 34 | 9.005 | ||
| Pfam | 151 | 183 | 33 | 0.0093 | ||
| SMART | 192 | 232 | 41 | 3.90E-06 | ||
| Pfam | 193 | 232 | 40 | 2.70E-05 | ||
| ProSiteProfiles | 199 | 241 | 43 | 10.909 | ||
| SMART | 251 | 298 | 48 | 13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj3g3v0309020.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0309020.2, powered by CORGI.
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