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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0381720 |
| Transcript ID | Lj3g3v0381720.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | calcium-binding protein [Lotus japonicus] gi|28301674|emb|CAB63264.3| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 29 | 29 | – | – | |
| PANTHER | 81 | 230 | 150 | 3.00E-107 | – | |
| PANTHER | 81 | 230 | 150 | 3.00E-107 | – | |
| ProSiteProfiles | 81 | 116 | 36 | 15.043 | ||
| SUPERFAMILY | 84 | 224 | 141 | 7.91E-43 | ||
| Gene3D | 84 | 168 | 85 | 4.70E-30 | ||
| CDD | 85 | 142 | 58 | 4.79E-16 | ||
| SMART | 85 | 113 | 29 | 1.00E-04 | ||
| Pfam | 85 | 147 | 63 | 4.10E-13 | ||
| ProSitePatterns | 94 | 106 | 13 | – | ||
| ProSiteProfiles | 117 | 152 | 36 | 12.812 | ||
| SMART | 121 | 149 | 29 | 5.30E-04 | ||
| ProSitePatterns | 130 | 142 | 13 | – | ||
| ProSiteProfiles | 154 | 189 | 36 | 17.387 | ||
| Pfam | 156 | 222 | 67 | 4.80E-12 | ||
| SMART | 158 | 186 | 29 | 2.40E-07 | ||
| CDD | 162 | 222 | 61 | 1.01E-17 | ||
| ProSitePatterns | 167 | 179 | 13 | – | ||
| Gene3D | 169 | 222 | 54 | 2.40E-23 | ||
| ProSiteProfiles | 192 | 227 | 36 | 15.546 | ||
| SMART | 196 | 224 | 29 | 4.30E-05 | ||
| ProSitePatterns | 205 | 217 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj3g3v0381720.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0381720.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.