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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0392820 |
| Transcript ID | Lj3g3v0392820.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc finger CCCH domain-containing protein 37-like [Glycine max] gi|356523523|ref|XP_003530387.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 138 | 138 | 1.10E-181 | – | |
| PANTHER | 1 | 138 | 138 | 1.10E-181 | – | |
| ProSiteProfiles | 7 | 35 | 29 | 13.263 | ||
| SMART | 7 | 34 | 28 | 0.0034 | ||
| SUPERFAMILY | 8 | 34 | 27 | 3.66E-05 | ||
| Pfam | 9 | 33 | 25 | 2.10E-08 | ||
| Gene3D | 13 | 32 | 20 | 8.20E-04 | ||
| SMART | 59 | 86 | 28 | 7.20E-06 | ||
| ProSiteProfiles | 59 | 87 | 29 | 15.263 | ||
| Pfam | 61 | 86 | 26 | 3.20E-09 | ||
| SUPERFAMILY | 64 | 85 | 22 | 2.88E-05 | ||
| Gene3D | 65 | 84 | 20 | 4.70E-04 | ||
| SMART | 97 | 124 | 28 | 2.20E-06 | ||
| ProSiteProfiles | 97 | 125 | 29 | 15.131 | ||
| Pfam | 101 | 124 | 24 | 1.90E-09 | ||
| SUPERFAMILY | 102 | 125 | 24 | 1.30E-05 | ||
| Gene3D | 102 | 123 | 22 | 7.00E-05 | ||
| PANTHER | 157 | 326 | 170 | 1.10E-181 | – | |
| PANTHER | 157 | 326 | 170 | 1.10E-181 | – | |
| SMART | 175 | 202 | 28 | 2.60E-07 | ||
| ProSiteProfiles | 175 | 203 | 29 | 15.075 | ||
| Pfam | 178 | 201 | 24 | 5.40E-10 | ||
| SUPERFAMILY | 179 | 204 | 26 | 3.14E-06 | ||
| Gene3D | 181 | 201 | 21 | 2.70E-05 | ||
| SMART | 260 | 287 | 28 | 2.60E-06 | ||
| ProSiteProfiles | 260 | 288 | 29 | 15.657 | ||
| SUPERFAMILY | 263 | 289 | 27 | 1.57E-06 | ||
| Pfam | 264 | 286 | 23 | 3.70E-10 | ||
| Gene3D | 266 | 286 | 21 | 3.40E-05 | ||
| ProSiteProfiles | 313 | 326 | 14 | 6.69 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj3g3v0392820.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0392820.3, powered by CORGI.
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