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PF00642

Source: Pfam

Description

Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046872
Molecular function Metal ion binding Interacting selectively and non-covalently with any metal ion.
Subterm of

Associated Lotus transcripts 139

Transcript Name Description Predicted domains Domain count
Lj0g3v0004639.1
– Zinc finger C-x8-C-x5-C-x3-H type family protein [Theobroma cacao] gi|508786323|gb|EOY33579.1|
Domains
19
Lj0g3v0006099.1
– PREDICTED: zinc finger CCCH domain-containing protein 48-like [Glycine max] gi|356530911|ref|XP_003534022.1|
Domains
9
Lj0g3v0064839.1
– PREDICTED: zinc finger CCCH domain-containing protein 66-like [Glycine max] gi|356541737|ref|XP_003539330.1|
Domains
15
Lj0g3v0071689.1
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|358348997|ref|XP_003638527.1|
Domains
9
Lj0g3v0180079.1
– Splicing factor U2af subunit isoform 1 [Zea mays] gi|413948479|gb|AFW81128.1|
Domains
11
Lj0g3v0261659.1
– PREDICTED: zinc finger CCCH domain-containing protein 43-like [Glycine max] gi|356507323|ref|XP_003522417.1|
Domains
9
Lj0g3v0290279.1
– PREDICTED: zinc finger CCCH domain-containing protein 5-like [Glycine max] gi|356528629|ref|XP_003532902.1|
Domains
17
Lj0g3v0290279.2
– PREDICTED: zinc finger CCCH domain-containing protein 5-like [Glycine max] gi|356528629|ref|XP_003532902.1|
Domains
14
Lj0g3v0290329.1
– Zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana] gi|15218489|ref|NP_172503.1|
Domains
9
Lj0g3v0290329.2
– U2 auxiliary factor small subunit [Medicago truncatula] gi|140053487|gb|ABO80462.1|
Domains
9
Lj0g3v0290329.3
– Zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana] gi|15218489|ref|NP_172503.1|
Domains
11
Lj0g3v0308719.1
– PREDICTED: zinc finger CCCH domain-containing protein 43-like [Glycine max] gi|356563166|ref|XP_003549835.1|
Domains
9
Lj0g3v0361449.1
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357495183|ref|XP_003617880.1|
Domains
8
Lj1g3v1301650.1
– PREDICTED: zinc finger CCCH domain-containing protein 38-like [Cicer arietinum] gi|502136979|ref|XP_004502920.1|
Domains
9
Lj1g3v1301650.2
– PREDICTED: zinc finger CCCH domain-containing protein 38-like [Cicer arietinum] gi|502136979|ref|XP_004502920.1|
Domains
7
Lj1g3v1301650.3
– PREDICTED: zinc finger CCCH domain-containing protein 38-like [Cicer arietinum] gi|502136979|ref|XP_004502920.1|
Domains
9
Lj1g3v1301650.4
– PREDICTED: zinc finger CCCH domain-containing protein 38-like [Cicer arietinum] gi|502136979|ref|XP_004502920.1|
Domains
9
Lj1g3v1301650.5
– PREDICTED: zinc finger CCCH domain-containing protein 38-like [Cicer arietinum] gi|502136979|ref|XP_004502920.1|
Domains
9
Lj1g3v1318060.1
– PREDICTED: zinc finger CCCH domain-containing protein 55-like isoform X2 [Cicer arietinum] gi|502139875|ref|XP_004503948.1|
Domains
8
Lj1g3v1784260.1
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357465645|ref|XP_003603107.1|
Domains
8
Lj1g3v2809170.1
– PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform 2 [Glycine max] gi|356531908|ref|XP_003534518.1|
Domains
9
Lj1g3v4275530.1
– PREDICTED: zinc finger CCCH domain-containing protein 30-like [Cicer arietinum] gi|502108910|ref|XP_004493518.1|
Domains
17
Lj1g3v4317600.1
– PREDICTED: zinc finger CCCH domain-containing protein 14-like [Glycine max] gi|356504857|ref|XP_003521211.1|
Domains
9
Lj1g3v4694450.1
– PREDICTED: splicing factor U2af small subunit B-like [Glycine max] gi|356505320|ref|XP_003521439.1|
Domains
17
Lj1g3v4765230.1
– Methyltransferase FkbM family [Medicago truncatula] gi|357446127|ref|XP_003593341.1|
Domains
14
Lj2g3v2089800.1
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357481341|ref|XP_003610956.1|
Domains
18
Lj2g3v2246170.1
– PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cicer arietinum] gi|502095994|ref|XP_004490591.1|
Domains
16
Lj2g3v2276480.2
– PREDICTED: zinc finger CCCH domain-containing protein 66-like isoform 1 [Glycine max] gi|356500868|ref|XP_003519252.1|
Domains
20
Lj2g3v2748860.1
– PREDICTED: zinc finger CCCH domain-containing protein 29-like isoform 1 [Glycine max] gi|356552713|ref|XP_003544707.1|
Domains
16
Lj2g3v2877210.1
– PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cicer arietinum] gi|502097829|ref|XP_004491091.1|
Domains
9
Lj2g3v2877220.1
– PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cicer arietinum] gi|502097829|ref|XP_004491091.1|
Domains
9
Lj3g3v0075780.1
– PREDICTED: zinc finger protein 36, C3H1 type-like 2-B-like [Cicer arietinum] gi|502080823|ref|XP_004486691.1|
Domains
7
Lj3g3v0392820.2
– PREDICTED: zinc finger CCCH domain-containing protein 37-like [Glycine max] gi|356554798|ref|XP_003545729.1|
Domains
8
Lj3g3v0392820.3
– PREDICTED: zinc finger CCCH domain-containing protein 37-like [Glycine max] gi|356523523|ref|XP_003530387.1|
Domains
8
Lj3g3v0489500.1
– PREDICTED: zinc finger CCCH domain-containing protein 30-like [Glycine max] gi|356544173|ref|XP_003540529.1|
Domains
18
Lj3g3v0489500.2
– PREDICTED: zinc finger CCCH domain-containing protein 30-like [Glycine max] gi|356544173|ref|XP_003540529.1|
Domains
8
Lj3g3v0822530.1
– PREDICTED: zinc finger CCCH domain-containing protein 53-like [Glycine max] gi|356542909|ref|XP_003539907.1|
Domains
17
Lj3g3v0822530.2
– PREDICTED: zinc finger CCCH domain-containing protein 53-like [Glycine max] gi|356542909|ref|XP_003539907.1|
Domains
17
Lj3g3v0850570.1
– PREDICTED: zinc finger CCCH domain-containing protein 69-like isoform X1 [Cicer arietinum] gi|502164838|ref|XP_004513288.1|
Domains
19
Lj3g3v0850590.1
– PREDICTED: E3 ubiquitin-protein ligase makorin-like [Glycine max] gi|356557148|ref|XP_003546880.1|
Domains
20
Lj3g3v2576220.1
– PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cicer arietinum] gi|502156562|ref|XP_004510536.1|
Domains
15
Lj3g3v3006550.1
– Zinc finger C-x8-C-x5-C-x3-H type family protein [Theobroma cacao] gi|508786323|gb|EOY33579.1|
Domains
16
Lj3g3v3085960.1
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356544604|ref|XP_003540739.1|
Domains
19
Lj3g3v3085960.2
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356541487|ref|XP_003539207.1|
Domains
24
Lj3g3v3085960.3
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356544604|ref|XP_003540739.1|
Domains
24
Lj3g3v3639420.1
– PREDICTED: zinc finger CCCH domain-containing protein 16-like [Cicer arietinum] gi|502144115|ref|XP_004505582.1|
Domains
9
Lj3g3v3652410.2
– PREDICTED: zinc finger CCCH domain-containing protein 53-like [Glycine max] gi|356542909|ref|XP_003539907.1|
Domains
17
Lj4g3v0216600.1
– PREDICTED: zinc finger CCCH domain-containing protein 1-like [Glycine max] gi|356506028|ref|XP_003521790.1|
Domains
18
Lj4g3v1107600.1
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357516999|ref|XP_003628788.1|
Domains
9
Lj4g3v1107610.1
– PREDICTED: zinc finger CCCH domain-containing protein 12-like [Cicer arietinum] gi|502154537|ref|XP_004509736.1|
Domains
9
Lj4g3v1389250.1
– PREDICTED: zinc finger CCCH domain-containing protein 43-like [Glycine max] gi|356563166|ref|XP_003549835.1|
Domains
9
Lj4g3v1389250.2
– PREDICTED: zinc finger CCCH domain-containing protein 43-like [Cicer arietinum] gi|502176303|ref|XP_004515843.1|
Domains
9
Lj4g3v1865750.1
– PREDICTED: zinc finger CCCH domain-containing protein 39-like [Glycine max] gi|356565198|ref|XP_003550830.1|
Domains
9
Lj4g3v1876790.1
– PREDICTED: zinc finger CCCH domain-containing protein 34-like [Glycine max] gi|356513935|ref|XP_003525663.1|
Domains
10
Lj4g3v2369420.1
– PREDICTED: zinc finger CCCH domain-containing protein 34-like [Cicer arietinum] gi|502151129|ref|XP_004508292.1|
Domains
9
Lj4g3v2742990.1
– PREDICTED: zinc finger CCCH domain-containing protein 55-like isoform X2 [Cicer arietinum] gi|502139875|ref|XP_004503948.1|
Domains
8
Lj5g3v0921030.1
– PREDICTED: zinc finger CCCH domain-containing protein 14-like [Glycine max] gi|356504859|ref|XP_003521212.1|
Domains
17
Lj5g3v1276100.1
– PREDICTED: zinc finger CCCH domain-containing protein ZFN-like isoform 2 [Glycine max] gi|356531908|ref|XP_003534518.1|
Domains
9
Lj5g3v1531170.1
– PREDICTED: zinc finger CCCH domain-containing protein 3-like isoform X1 [Cicer arietinum] gi|502116891|ref|XP_004495629.1|
Domains
10
Lj5g3v1665190.1
– PREDICTED: zinc finger CCCH domain-containing protein 32-like [Glycine max] gi|356500268|ref|XP_003518955.1|
Domains
9
Lj5g3v1665190.2
– PREDICTED: zinc finger CCCH domain-containing protein 32-like [Glycine max] gi|356500268|ref|XP_003518955.1|
Domains
9
Lj5g3v1665190.3
– PREDICTED: zinc finger CCCH domain-containing protein 32-like [Glycine max] gi|356500268|ref|XP_003518955.1|
Domains
9
Lj5g3v2179600.1
– PREDICTED: zinc finger CCCH domain-containing protein 15-like isoform X1 [Cicer arietinum] gi|502120608|ref|XP_004497020.1|
Domains
10
Lj5g3v2300300.1
– PREDICTED: zinc finger CCCH domain-containing protein 44-like [Cicer arietinum] gi|502121682|ref|XP_004497409.1|
Domains
18
Lj6g3v0792120.1
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356527124|ref|XP_003532163.1|
Domains
19
Lj6g3v0792120.2
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356527124|ref|XP_003532163.1|
Domains
20
Lj6g3v0792120.3
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356527124|ref|XP_003532163.1|
Domains
19
Lj6g3v0792120.4
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356527124|ref|XP_003532163.1|
Domains
19
Lj6g3v0831440.2
– PREDICTED: zinc finger CCCH domain-containing protein 18-like [Glycine max] gi|356567208|ref|XP_003551813.1|
Domains
12
Lj6g3v1018460.1
– PREDICTED: zinc finger protein 36, C3H1 type-like 2-like isoform X1 [Cicer arietinum] gi|502142052|ref|XP_004504769.1|
Domains
9
Lj6g3v1931800.1
– PREDICTED: zinc finger CCCH domain-containing protein 34-like [Cicer arietinum] gi|502078729|ref|XP_004486037.1|
Domains
9
Lj6g3v2007290.1
– PREDICTED: zinc finger CCCH domain-containing protein 27-like [Glycine max] gi|356557709|ref|XP_003547155.1|
Domains
10
Lj6g3v2043280.1
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357446695|ref|XP_003593623.1|
Domains
10
LotjaGi1g1v0067800.1
– Zinc finger CCCH domain protein; TAIR: AT1G04990.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q94AD9|C3H3_ARATH Zinc finger CCCH domain-containing protein 3; TrEMBL-Plants: tr|A0A151U1F3|A0A151U1F3_CAJCA Zinc finger CCCH domain-containing protein 3; Found in the gene: LotjaGi1g1v0067800
Domains
11
LotjaGi1g1v0077000.1
– Zinc finger CCCH domain protein, putative; TAIR: AT2G40140.1 zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q9XEE6|C3H29_ARATH Zinc finger CCCH domain-containing protein 29; TrEMBL-Plants: tr|V7BA69|V7BA69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0077000
Domains
17
LotjaGi1g1v0119800.1
– Zinc finger CCCH domain protein, putative; TAIR: AT5G58620.1 zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q9LUZ4|C3H66_ARATH Zinc finger CCCH domain-containing protein 66; TrEMBL-Plants: tr|I1JHD2|I1JHD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0119800
Domains
20
LotjaGi1g1v0121400.1
– RNA binding protein; TAIR: AT3G47120.2 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9SD61|C3H42_ARATH Zinc finger CCCH domain-containing protein 42; TrEMBL-Plants: tr|I1JHC2|I1JHC2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0121400
Domains
19
LotjaGi1g1v0317800_LC.1
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|A0A1J7GN09|A0A1J7GN09_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317800_LC
Domains
12
LotjaGi1g1v0317800_LC.2
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|A0A1J7GN09|A0A1J7GN09_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317800_LC
Domains
12
LotjaGi1g1v0317800_LC.3
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|A0A1J7GN09|A0A1J7GN09_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317800_LC
Domains
12
LotjaGi1g1v0365000.1
– Zinc finger CCCH domain protein; TAIR: AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9FU27|C3H2_ORYSJ Zinc finger CCCH domain-containing protein 2; TrEMBL-Plants: tr|G7J714|G7J714_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi1g1v0365000
Domains
9
LotjaGi1g1v0484400.1
– Zinc finger CCCH domain protein; TAIR: AT3G02830.1 zinc finger protein 1; Swiss-Prot: sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like; TrEMBL-Plants: tr|I1L6B1|I1L6B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0484400
Domains
11
LotjaGi1g1v0680100.1
– Splicing factor U2af small subunit A-like protein; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9FMY5|U2AFB_ARATH Splicing factor U2af small subunit B; TrEMBL-Plants: tr|I3SLP5|I3SLP5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0680100
Domains
18
LotjaGi1g1v0720900.1
– Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|A0A1J7HTW3|A0A1J7HTW3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0720900
Domains
17
LotjaGi1g1v0720900.2
– Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|A0A1J7HTW3|A0A1J7HTW3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0720900
Domains
17
LotjaGi1g1v0720900.3
– Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|A0A1J7HTW3|A0A1J7HTW3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0720900
Domains
17
LotjaGi1g1v0726000.1
– Zinc finger CCCH domain-containing protein; TAIR: AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein; Swiss-Prot: sp|Q7F8R0|C3H14_ORYSJ Zinc finger CCCH domain-containing protein 14; TrEMBL-Plants: tr|I3T0H6|I3T0H6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0726000
Domains
19
LotjaGi1g1v0746600_LC.1
– Frigida-like 2; TAIR: AT5G27230.1 Frigida-like protein; Swiss-Prot: sp|Q5XV31|FRL5_ARATH FRIGIDA-like protein 5; TrEMBL-Plants: tr|I3SW75|I3SW75_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0746600_LC
Domains
14
LotjaGi2g1v0011500.1
– Splicing factor U2af small subunit A; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9FMY5|U2AFB_ARATH Splicing factor U2af small subunit B; TrEMBL-Plants: tr|A0A1D1Z0R2|A0A1D1Z0R2_9ARAE Splicing factor U2af small subunit A; Found in the gene: LotjaGi2g1v0011500
Domains
20
LotjaGi2g1v0011500.2
– Splicing factor U2af small subunit A; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9FMY5|U2AFB_ARATH Splicing factor U2af small subunit B; TrEMBL-Plants: tr|A0A1D1Z0R2|A0A1D1Z0R2_9ARAE Splicing factor U2af small subunit A; Found in the gene: LotjaGi2g1v0011500
Domains
20
LotjaGi2g1v0130200_LC.1
– Zinc finger CCCH domain protein; TAIR: AT5G18550.2 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42; TrEMBL-Plants: tr|A0A0B2PEA2|A0A0B2PEA2_GLYSO Zinc finger CCCH domain-containing protein 43; Found in the gene: LotjaGi2g1v0130200_LC
Domains
9
LotjaGi2g1v0360600.1
– 23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT2G28450.1 zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q8L7S3|C3H24_ARATH Zinc finger CCCH domain-containing protein 24; TrEMBL-Plants: tr|K7LTE4|K7LTE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0360600
Domains
23
LotjaGi2g1v0443700.1
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT3G21100.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q94CJ8|C3H55_ARATH Zinc finger CCCH domain-containing protein 55; TrEMBL-Plants: tr|G7K989|G7K989_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi2g1v0443700
Domains
21
LotjaGi2g1v0458400.1
– RING zinc finger protein, putative; TAIR: AT1G01350.1 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp|Q8GX84|C3H1_ARATH Zinc finger CCCH domain-containing protein 1; TrEMBL-Plants: tr|A0A151SCN7|A0A151SCN7_CAJCA Zinc finger CCCH domain-containing protein 1; Found in the gene: LotjaGi2g1v0458400
Domains
21
LotjaGi3g1v0011500_LC.1
– Zinc finger CCCH domain protein; TAIR: AT1G66810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q6L5G1|C3H39_ORYSJ Zinc finger CCCH domain-containing protein 39; TrEMBL-Plants: tr|V7BXJ1|V7BXJ1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0011500_LC
Domains
10
LotjaGi3g1v0060800.1
– Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|I1LVD6|I1LVD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0060800
Domains
18
LotjaGi3g1v0060800.2
– Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|I1LVD6|I1LVD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0060800
Domains
18
LotjaGi3g1v0117500.1
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q0D3J9|C3H53_ORYSJ Zinc finger CCCH domain-containing protein 53; TrEMBL-Plants: tr|A0A0R0H030|A0A0R0H030_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0117500
Domains
20
LotjaGi3g1v0117500.2
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q0D3J9|C3H53_ORYSJ Zinc finger CCCH domain-containing protein 53; TrEMBL-Plants: tr|I1LNZ6|I1LNZ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0117500
Domains
20
LotjaGi3g1v0117500.3
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q0D3J9|C3H53_ORYSJ Zinc finger CCCH domain-containing protein 53; TrEMBL-Plants: tr|I1LNZ6|I1LNZ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0117500
Domains
20
LotjaGi3g1v0123500.1
– Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp|E0X9N4|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr|I1MJM7|I1MJM7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0123500
Domains
21
LotjaGi3g1v0172600.1
– Splicing factor U2af small subunit A; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A; TrEMBL-Plants: tr|A0A1J7IB44|A0A1J7IB44_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0172600
Domains
20
LotjaGi3g1v0446100.1
– Zinc finger CCCH domain protein; TAIR: AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9ZWA1|C3H2_ARATH Zinc finger CCCH domain-containing protein 2; TrEMBL-Plants: tr|I1LUH8|I1LUH8_SOYBN C3H-type 1 Zn transcription factor; Found in the gene: LotjaGi3g1v0446100
Domains
8
LotjaGi3g1v0481000.1
– Splicing factor U2af small subunit A; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A; TrEMBL-Plants: tr|A0A1J7IB44|A0A1J7IB44_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481000
Domains
17
LotjaGi3g1v0541000.1
– Zinc finger CCCH domain-containing protein; TAIR: AT1G75340.3 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9FWS3|C3H16_ARATH Zinc finger CCCH domain-containing protein 16; TrEMBL-Plants: tr|G7JSU2|G7JSU2_MEDTR CCCH-type zinc finger protein, putative; Found in the gene: LotjaGi3g1v0541000
Domains
10
LotjaGi3g1v0546300.1
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q0D3J9|C3H53_ORYSJ Zinc finger CCCH domain-containing protein 53; TrEMBL-Plants: tr|V7AH88|V7AH88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0546300
Domains
20
LotjaGi3g1v0546300.2
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q0D3J9|C3H53_ORYSJ Zinc finger CCCH domain-containing protein 53; TrEMBL-Plants: tr|V7AH88|V7AH88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0546300
Domains
20
LotjaGi3g1v0546400.1
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT3G51950.1 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q0D3J9|C3H53_ORYSJ Zinc finger CCCH domain-containing protein 53; TrEMBL-Plants: tr|V7AH88|V7AH88_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0546400
Domains
20
LotjaGi4g1v0169400.1
– Zinc finger CCCH domain protein; TAIR: AT1G32360.1 Zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q9LQM3|C3H12_ARATH Zinc finger CCCH domain-containing protein 12; TrEMBL-Plants: tr|G7LH15|G7LH15_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi4g1v0169400
Domains
12
LotjaGi4g1v0225100.1
– Zinc finger CCCH domain protein; TAIR: AT3G48440.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein 43; TrEMBL-Plants: tr|A0A0S3R5V6|A0A0S3R5V6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0225100
Domains
10
LotjaGi4g1v0268600.1
– Zinc finger CCCH domain protein; TAIR: AT3G19360.1 Zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q9LT81|C3H39_ARATH Zinc finger CCCH domain-containing protein 39; TrEMBL-Plants: tr|K7ML63|K7ML63_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0268600
Domains
12
LotjaGi4g1v0269100.1
– Zinc finger CCCH domain protein; TAIR: AT2G02160.1 CCCH-type zinc finger family protein; Swiss-Prot: sp|Q6AT25|C3H34_ORYSJ Zinc finger CCCH domain-containing protein 34; TrEMBL-Plants: tr|A0A0R0JP67|A0A0R0JP67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0269100
Domains
9
LotjaGi4g1v0269100.2
– Zinc finger CCCH domain protein; TAIR: AT2G02160.1 CCCH-type zinc finger family protein; Swiss-Prot: sp|Q9ZUM0|C3H17_ARATH Zinc finger CCCH domain-containing protein 17; TrEMBL-Plants: tr|K7KNK6|K7KNK6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0269100
Domains
12
LotjaGi4g1v0344800.1
– Zinc finger CCCH domain protein; TAIR: AT5G18550.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58; TrEMBL-Plants: tr|A0A151STD4|A0A151STD4_CAJCA Zinc finger CCCH domain-containing protein 32; Found in the gene: LotjaGi4g1v0344800
Domains
11
LotjaGi4g1v0408600.1
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|G7LE04|G7LE04_MEDTR Zinc finger C-x8-C-x5-C-x3-H type family protein; Found in the gene: LotjaGi4g1v0408600
Domains
12
LotjaGi4g1v0408600.2
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|G7LE04|G7LE04_MEDTR Zinc finger C-x8-C-x5-C-x3-H type family protein; Found in the gene: LotjaGi4g1v0408600
Domains
12
LotjaGi5g1v0035100.1
– Zinc finger CCCH domain protein, putative; TAIR: AT1G10320.2 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9SY74|C3H5_ARATH Zinc finger CCCH domain-containing protein 5; TrEMBL-Plants: tr|A0A178W6J5|A0A178W6J5_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0035100
Domains
9
LotjaGi5g1v0035100.2
– Zinc finger CCCH domain protein, putative; TAIR: AT1G10320.2 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9SY74|C3H5_ARATH Zinc finger CCCH domain-containing protein 5; TrEMBL-Plants: tr|A0A178W6J5|A0A178W6J5_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0035100
Domains
9
LotjaGi5g1v0035100.3
– Zinc finger CCCH domain protein, putative; TAIR: AT1G10320.2 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9SY74|C3H5_ARATH Zinc finger CCCH domain-containing protein 5; TrEMBL-Plants: tr|A0A178W6J5|A0A178W6J5_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0035100
Domains
9
LotjaGi5g1v0203400.1
– Zinc finger CCCH domain protein; TAIR: AT3G02830.1 zinc finger protein 1; Swiss-Prot: sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like; TrEMBL-Plants: tr|I1L6B1|I1L6B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0203400
Domains
11
LotjaGi5g1v0232900.1
– U1 small nuclear ribonucleoprotein C; TAIR: AT5G26749.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q0JP11|C3H3_ORYSJ Zinc finger CCCH domain-containing protein 3; TrEMBL-Plants: tr|I1LB10|I1LB10_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0232900
Domains
13
LotjaGi5g1v0263800.1
– Zinc finger CCCH domain protein; TAIR: AT2G47850.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32; TrEMBL-Plants: tr|A0A0L9TWY8|A0A0L9TWY8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0263800
Domains
11
LotjaGi5g1v0263800.2
– Zinc finger CCCH domain protein; TAIR: AT2G47850.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32; TrEMBL-Plants: tr|I1JFH1|I1JFH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0263800
Domains
11
LotjaGi5g1v0263800.3
– Zinc finger CCCH domain protein; TAIR: AT2G47850.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32; TrEMBL-Plants: tr|I1JFH1|I1JFH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0263800
Domains
11
LotjaGi5g1v0263800.4
– Zinc finger CCCH domain protein; TAIR: AT2G47850.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32; TrEMBL-Plants: tr|A0A0L9TWY8|A0A0L9TWY8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0263800
Domains
11
LotjaGi5g1v0263800.5
– Zinc finger CCCH domain protein; TAIR: AT2G47850.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32; TrEMBL-Plants: tr|A0A0L9TWY8|A0A0L9TWY8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0263800
Domains
11
LotjaGi5g1v0334600.1
– Zinc finger CCCH domain protein; TAIR: AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9C9F5|C3H15_ARATH Zinc finger CCCH domain-containing protein 15; TrEMBL-Plants: tr|A0A072VQ63|A0A072VQ63_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi5g1v0334600
Domains
11
LotjaGi5g1v0364400.1
– Zinc finger CCCH domain-containing protein; TAIR: AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein; Swiss-Prot: sp|Q7F8R0|C3H14_ORYSJ Zinc finger CCCH domain-containing protein 14; TrEMBL-Plants: tr|C6TA41|C6TA41_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0364400
Domains
20
LotjaGi6g1v0131000_LC.1
– Zinc finger CCCH domain protein, putative; TAIR: AT2G40140.1 zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q9XEE6|C3H29_ARATH Zinc finger CCCH domain-containing protein 29; TrEMBL-Plants: tr|A0A0L9UXM3|A0A0L9UXM3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0131000_LC
Domains
7
LotjaGi6g1v0149000.1
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|A0A0B2NQX3|A0A0B2NQX3_GLYSO Zinc finger CCCH domain-containing protein 18; Found in the gene: LotjaGi6g1v0149000
Domains
23
LotjaGi6g1v0149000.2
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|A0A0R0IVN5|A0A0R0IVN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0149000
Domains
22
LotjaGi6g1v0149000.3
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|A0A0B2NQX3|A0A0B2NQX3_GLYSO Zinc finger CCCH domain-containing protein 18; Found in the gene: LotjaGi6g1v0149000
Domains
22
LotjaGi6g1v0149000.4
– RNA-binding domain CCCH-type zinc finger protein; TAIR: AT2G05160.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein; Swiss-Prot: sp|Q9SJ41|C3H18_ARATH Zinc finger CCCH domain-containing protein 18; TrEMBL-Plants: tr|A0A0R0IVN5|A0A0R0IVN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0149000
Domains
22
LotjaGi6g1v0308000.1
– Zinc finger CCCH domain protein; TAIR: AT5G18550.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58; TrEMBL-Plants: tr|G7IPY9|G7IPY9_MEDTR Zinc finger C-x8-C-x5-C-x3-H type protein; Found in the gene: LotjaGi6g1v0308000
Domains
11
LotjaGi6g1v0329500.1
– Zinc finger CCCH domain protein; TAIR: AT2G33835.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84VG7|FES1_ARATH Protein FRIGIDA-ESSENTIAL 1; TrEMBL-Plants: tr|V7BSY5|V7BSY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0329500
Domains
9
LotjaGi6g1v0329500.2
– Zinc finger CCCH domain protein; TAIR: AT2G33835.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84VG7|FES1_ARATH Protein FRIGIDA-ESSENTIAL 1; TrEMBL-Plants: tr|V7BSY5|V7BSY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0329500
Domains
9
LotjaGi6g1v0329500.3
– Zinc finger CCCH domain protein; TAIR: AT2G33835.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84VG7|FES1_ARATH Protein FRIGIDA-ESSENTIAL 1; TrEMBL-Plants: tr|V7BSY5|V7BSY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0329500
Domains
9
LotjaGi6g1v0329500.4
– Zinc finger CCCH domain protein; TAIR: AT2G33835.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84VG7|FES1_ARATH Protein FRIGIDA-ESSENTIAL 1; TrEMBL-Plants: tr|V7BSY5|V7BSY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0329500
Domains
9
LotjaGi6g1v0329500.5
– Zinc finger CCCH domain protein; TAIR: AT2G33835.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q84VG7|FES1_ARATH Protein FRIGIDA-ESSENTIAL 1; TrEMBL-Plants: tr|V7BSY5|V7BSY5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0329500
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 0.72