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Lj3g3v0594260.2

Overview

Field Value
Gene ID Lj3g3v0594260
Transcript ID Lj3g3v0594260.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase-like [Glycine max] gi|356522966|ref|XP_003530113.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 147 147
PANTHER 65 368 304 3.90E-131
PANTHER 65 368 304 3.90E-131
Pfam 109 366 258 5.10E-26
TMHMM 142 164 23
Phobius 148 167 20
Phobius 168 172 5
Phobius 173 194 22
TMHMM 174 193 20
Phobius 195 205 11
Phobius 206 225 20
TMHMM 206 223 18
Phobius 226 230 5
TMHMM 228 250 23
Phobius 231 251 21
Phobius 252 262 11
TMHMM 263 285 23
Phobius 263 286 24
Phobius 287 297 11
Phobius 298 321 24
TMHMM 300 321 22
Phobius 322 368 47

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).

Expression data

Expression pattern

Expression pattern of Lj3g3v0594260.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0594260.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.