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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0598360 |
| Transcript ID | Lj3g3v0598360.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] gi|358344177|ref|XP_003636168.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 60 | 60 | – | – | |
| MobiDBLite | 78 | 212 | 135 | – | – | |
| PANTHER | 169 | 187 | 19 | 5.30E-160 | – | |
| PANTHER | 169 | 187 | 19 | 5.30E-160 | – | |
| Gene3D | 216 | 298 | 83 | 4.20E-22 | ||
| SUPERFAMILY | 217 | 300 | 84 | 1.61E-23 | ||
| PANTHER | 219 | 347 | 129 | 5.30E-160 | – | |
| PANTHER | 219 | 347 | 129 | 5.30E-160 | – | |
| ProSiteProfiles | 222 | 300 | 79 | 17.848 | ||
| SMART | 223 | 296 | 74 | 5.50E-24 | ||
| Pfam | 224 | 292 | 69 | 7.60E-20 | ||
| Gene3D | 299 | 387 | 89 | 3.20E-14 | ||
| SUPERFAMILY | 301 | 466 | 166 | 7.43E-26 | ||
| ProSiteProfiles | 302 | 386 | 85 | 13.891 | ||
| SMART | 303 | 382 | 80 | 1.90E-07 | ||
| CDD | 304 | 382 | 79 | 8.24E-13 | – | |
| Pfam | 304 | 370 | 67 | 4.20E-08 | ||
| Gene3D | 396 | 491 | 96 | 8.90E-14 | ||
| PANTHER | 398 | 486 | 89 | 5.30E-160 | – | |
| PANTHER | 398 | 486 | 89 | 5.30E-160 | – | |
| ProSiteProfiles | 399 | 481 | 83 | 13.226 | ||
| SMART | 400 | 475 | 76 | 4.90E-10 | ||
| Pfam | 401 | 466 | 66 | 7.40E-09 | ||
| CDD | 401 | 475 | 75 | 7.74E-11 | – | |
| MobiDBLite | 465 | 655 | 191 | – | – | |
| PANTHER | 535 | 578 | 44 | 5.30E-160 | – | |
| PANTHER | 535 | 578 | 44 | 5.30E-160 | – | |
| MobiDBLite | 715 | 738 | 24 | – | – | |
| PANTHER | 730 | 799 | 70 | 5.30E-160 | – | |
| PANTHER | 730 | 799 | 70 | 5.30E-160 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj3g3v0598360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0598360.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.