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cd00590

Source: CDD

Description

RRM_SF

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 130

Transcript Name Description Predicted domains Domain count
Lj0g3v0055869.1
– Sex lethal [Tribolium castaneum] gi|225543108|ref|NP_001139415.1|
Domains
9
Lj0g3v0067289.1
– Sex lethal [Tribolium castaneum] gi|225543108|ref|NP_001139415.1|
Domains
9
Lj0g3v0070579.1
– RNA-binding protein Elav1 [Capitella teleta] gi|239938028|gb|ACS36113.1|
Domains
7
Lj0g3v0088319.1
– Arginine/serine-rich splicing factor SC26 transcript II [Zea mays] gi|448878220|gb|AGE46073.1|
Domains
9
Lj0g3v0094339.1
– Serine/arginine-rich splicing factor 2 [Clonorchis sinensis] gi|358331785|dbj|GAA50546.1|
Domains
9
Lj0g3v0098089.1
– Splicing factor, arginine/serine-rich 2 [Salmo salar] gi|209155586|gb|ACI34025.1|
Domains
8
Lj0g3v0100679.1
– RNP-1 like RNA-binding protein [Denitrovibrio acetiphilus DSM 12809] gi|291286869|ref|YP_003503685.1|
Domains
8
Lj0g3v0130469.1
–
Domains
10
Lj0g3v0134999.1
– RNA recognition motif domain containing protein [Entamoeba nuttalli P19] gi|407045013|gb|EKE42956.1|
Domains
8
Lj0g3v0177219.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
11
Lj0g3v0199889.1
– E3 ubiquitin-protein ligase RLIM [Cricetulus griseus] gi|344248945|gb|EGW05049.1|
Domains
7
Lj0g3v0209199.1
– Splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria] gi|452822795|gb|EME29811.1|
Domains
9
Lj0g3v0286379.1
– RNA-binding family protein isoform 1 [Theobroma cacao] gi|508712992|gb|EOY04889.1|
Domains
6
Lj0g3v0310589.1
– Os07g0180800 [Oryza sativa Japonica Group] gi|297725433|ref|NP_001175080.1|
Domains
13
Lj0g3v0313449.1
– Probable RNA-binding protein 19, related [Neospora caninum Liverpool] gi|401399856|ref|XP_003880652.1|
Domains
9
Lj0g3v0323979.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
9
Lj0g3v0357289.1
– RNA binding protein [Plasmodium knowlesi strain H] gi|221055027|ref|XP_002258652.1|
Domains
8
Lj1g3v2898460.1
– PREDICTED: nucleolin-like [Cicer arietinum] gi|502106283|ref|XP_004492906.1|
Domains
11
Lj1g3v2898460.3
– Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] gi|357507981|ref|XP_003624279.1|
Domains
12
Lj1g3v3023780.1
– PREDICTED: ras GTPase-activating protein-binding protein 2-like isoform X1 [Cicer arietinum] gi|502091361|ref|XP_004489526.1|
Domains
19
Lj1g3v3023780.2
– PREDICTED: ras GTPase-activating protein-binding protein 2-like isoform X1 [Cicer arietinum] gi|502091361|ref|XP_004489526.1|
Domains
19
Lj1g3v3580500.2
– PREDICTED: ras GTPase-activating protein-binding protein 1-like [Cicer arietinum] gi|502171371|ref|XP_004515039.1|
Domains
19
Lj1g3v3580500.3
– PREDICTED: ras GTPase-activating protein-binding protein 1-like [Cicer arietinum] gi|502171371|ref|XP_004515039.1|
Domains
18
Lj1g3v3847270.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
9
Lj1g3v3963440.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
19
Lj1g3v4518310.1
– PREDICTED: ras GTPase-activating protein-binding protein 2-like [Cicer arietinum] gi|502110205|ref|XP_004493824.1|
Domains
19
Lj1g3v4717390.1
– RNA-binding protein [Medicago truncatula] gi|357511099|ref|XP_003625838.1|
Domains
14
Lj1g3v4717500.1
– PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear-like [Glycine max] gi|356503817|ref|XP_003520699.1|
Domains
12
Lj1g3v4717500.2
– PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear-like [Glycine max] gi|356503817|ref|XP_003520699.1|
Domains
14
Lj1g3v5060520.1
– PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine max] gi|356573261|ref|XP_003554781.1|
Domains
14
Lj1g3v5060590.1
– PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer arietinum] gi|502114130|ref|XP_004494871.1|
Domains
9
Lj1g3v5060590.2
– PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer arietinum] gi|502114130|ref|XP_004494871.1|
Domains
9
Lj2g3v0533560.1
– PREDICTED: ultraviolet-B receptor UVR8-like [Cicer arietinum] gi|502093514|ref|XP_004489969.1|
Domains
9
Lj2g3v0561180.1
– Arginine/serine-rich splicing factor SC26 transcript II [Zea mays] gi|448878220|gb|AGE46073.1|
Domains
7
Lj2g3v1069050.1
– PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max] gi|356499585|ref|XP_003518619.1|
Domains
7
Lj2g3v1069230.1
– Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax] gi|317419577|emb|CBN81614.1|
Domains
6
Lj2g3v1373360.1
– RNA recognition motif (RRM)-containing protein-like protein [Medicago truncatula] gi|357486079|ref|XP_003613327.1|
Domains
10
Lj2g3v1373360.2
– RNA recognition motif (RRM)-containing protein-like protein [Medicago truncatula] gi|357486079|ref|XP_003613327.1|
Domains
10
Lj2g3v3260050.1
– PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer arietinum] gi|502114130|ref|XP_004494871.1|
Domains
9
Lj3g3v0598360.1
– Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] gi|358344177|ref|XP_003636168.1|
Domains
11
Lj3g3v2441860.1
– Glycine-rich RNA-binding protein [uncultured bacterium] gi|406965367|gb|EKD91001.1|
Domains
9
Lj3g3v2993450.1
– PREDICTED: APOBEC1 complementation factor-like isoform 1 [Glycine max] gi|356542760|ref|XP_003539833.1|
Domains
14
Lj3g3v3085960.1
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356544604|ref|XP_003540739.1|
Domains
19
Lj3g3v3085960.2
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356541487|ref|XP_003539207.1|
Domains
24
Lj3g3v3085960.3
– PREDICTED: zinc finger CCCH domain-containing protein 24-like [Glycine max] gi|356544604|ref|XP_003540739.1|
Domains
24
Lj3g3v3261490.1
– PREDICTED: ras GTPase-activating protein-binding protein 2-like isoform X1 [Cicer arietinum] gi|502143480|ref|XP_004505357.1|
Domains
19
Lj4g3v0669750.1
– PREDICTED: ras GTPase-activating protein-binding protein 2-like isoform X1 [Cicer arietinum] gi|502143480|ref|XP_004505357.1|
Domains
19
Lj4g3v1024160.1
– Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] gi|357518111|ref|XP_003629344.1|
Domains
13
Lj4g3v1024160.2
– Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] gi|357518111|ref|XP_003629344.1|
Domains
13
Lj4g3v1597190.1
– PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like [Cicer arietinum] gi|502151912|ref|XP_004508674.1|
Domains
10
Lj4g3v1720850.1
– PREDICTED: ras GTPase-activating protein-binding protein 1-like [Fragaria vesca subsp]. vesca] gi|470126648|ref|XP_004299295.1|
Domains
19
Lj4g3v1802460.1
– PREDICTED: nipped-B-like protein B-like isoform X2 [Cicer arietinum] gi|502151665|ref|XP_004508553.1|
Domains
12
Lj4g3v2093770.1
– Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum] gi|226476676|emb|CAX72230.1|
Domains
9
Lj4g3v2593560.2
– RNA recognition motif-containing protein isoform 2 [Theobroma cacao] gi|508713270|gb|EOY05167.1|
Domains
23
Lj5g3v0712320.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
11
Lj5g3v1666250.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
13
Lj6g3v0086460.1
– Ras GTPase-activating protein-binding protein [Medicago truncatula] gi|357439835|ref|XP_003590195.1|
Domains
19
Lj6g3v0143880.3
– PREDICTED: pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like [Cicer arietinum] gi|502170587|ref|XP_004514863.1|
Domains
21
Lj6g3v1078200.1
– Uncharacterized protein TCM_031281 [Theobroma cacao] gi|508720849|gb|EOY12746.1|
Domains
10
Lj6g3v1227340.1
– RNA-binding region RNP-1 (RNA recognition motif) [Medicago truncatula] gi|124360677|gb|ABN08666.1|
Domains
11
LotjaGi1g1v0111400_LC.1
– RNA binding protein, putative; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A; TrEMBL-Plants: tr|A0A087SFR6|A0A087SFR6_AUXPR Eukaryotic translation initiation factor 3 subunit G; Found in the gene: LotjaGi1g1v0111400_LC
Domains
9
LotjaGi1g1v0192100_LC.1
– RNA-binding protein; TAIR: AT1G13690.1 ATPase E1; Swiss-Prot: sp|Q10422|YDC1_SCHPO Uncharacterized RNA-binding protein C25G10.01; TrEMBL-Plants: tr|A0A0K9PJ56|A0A0K9PJ56_ZOSMR Polyadenylate-binding protein; Found in the gene: LotjaGi1g1v0192100_LC
Domains
10
LotjaGi1g1v0206900_LC.2
– RNA-binding family protein; TAIR: AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q29RT0|RBMX_BOVIN RNA-binding motif protein, X chromosome; TrEMBL-Plants: tr|A0A151R197|A0A151R197_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0206900_LC
Domains
13
LotjaGi1g1v0207800_LC.1
– RNA-binding family protein; TAIR: AT4G34110.1 poly(A) binding protein 2; Swiss-Prot: sp|Q6IRQ4|RBMX_XENLA RNA-binding motif protein, X chromosome; TrEMBL-Plants: tr|M0YIM2|M0YIM2_HORVV Uncharacterized protein; Found in the gene: LotjaGi1g1v0207800_LC
Domains
10
LotjaGi1g1v0209800_LC.1
– RNA binding protein, putative; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q9FMG4|SC35_ARATH Serine/arginine-rich splicing factor SC35; TrEMBL-Plants: tr|A0A0A0LQG4|A0A0A0LQG4_CUCSA Uncharacterized protein; Found in the gene: LotjaGi1g1v0209800_LC
Domains
10
LotjaGi1g1v0263700_LC.2
– RNA-binding family protein; TAIR: AT4G13860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein; TrEMBL-Plants: tr|A0A0D2TRU7|A0A0D2TRU7_GOSRA Uncharacterized protein; Found in the gene: LotjaGi1g1v0263700_LC
Domains
14
LotjaGi1g1v0311000_LC.1
– RNA binding; TAIR: AT1G13690.1 ATPase E1; Swiss-Prot: sp|Q0U6E7|EIF3G_PHANO Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|A0A061QWM1|A0A061QWM1_9CHLO ELAV like protein 2/3/4; Found in the gene: LotjaGi1g1v0311000_LC
Domains
12
LotjaGi1g1v0460100_LC.1
– RNA binding protein; TAIR: AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q15427|SF3B4_HUMAN Splicing factor 3B subunit 4; TrEMBL-Plants: tr|A0A061F6T6|A0A061F6T6_THECC Uncharacterized protein; Found in the gene: LotjaGi1g1v0460100_LC
Domains
10
LotjaGi1g1v0492500.1
– RNA binding protein, putative; TAIR: AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|K7LFW0|K7LFW0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0492500
Domains
12
LotjaGi1g1v0513200.1
– RNA binding protein, putative; TAIR: AT5G60980.2 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|O94260|G3BP_SCHPO Putative G3BP-like protein; TrEMBL-Plants: tr|I1KWF6|I1KWF6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0513200
Domains
21
LotjaGi1g1v0576000_LC.1
– RNA binding protein, putative; TAIR: AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q9LEB4|RBP45_NICPL Polyadenylate-binding protein RBP45; TrEMBL-Plants: tr|A0A1B6QMT9|A0A1B6QMT9_SORBI Uncharacterized protein; Found in the gene: LotjaGi1g1v0576000_LC
Domains
12
LotjaGi1g1v0591700.1
– Nuclear transport factor 2 family protein with RNA binding domain; TAIR: AT3G25150.2 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|O94260|G3BP_SCHPO Putative G3BP-like protein; TrEMBL-Plants: tr|K7MSK4|K7MSK4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0591700
Domains
21
LotjaGi1g1v0591700.2
– RNA binding protein, putative; TAIR: AT3G25150.2 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|O94260|G3BP_SCHPO Putative G3BP-like protein; TrEMBL-Plants: tr|K7MSK4|K7MSK4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0591700
Domains
21
LotjaGi1g1v0591700.3
– Nuclear transport factor 2 family protein with RNA binding domain; TAIR: AT3G25150.2 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|O94260|G3BP_SCHPO Putative G3BP-like protein; TrEMBL-Plants: tr|K7MSK4|K7MSK4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0591700
Domains
21
LotjaGi1g1v0675400.1
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TVP5|A0A151TVP5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0675400
Domains
15
LotjaGi1g1v0675400.2
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TVP5|A0A151TVP5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0675400
Domains
15
LotjaGi1g1v0704000.1
– Nuclear transport factor 2 family protein with RNA binding domain; TAIR: AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|O94260|G3BP_SCHPO Putative G3BP-like protein; TrEMBL-Plants: tr|K7MYR4|K7MYR4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0704000
Domains
21
LotjaGi1g1v0796100.1
– RNA-binding protein; TAIR: AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|I1NCQ2|I1NCQ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0796100
Domains
15
LotjaGi1g1v0796100.2
– RNA-binding protein; TAIR: AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|I1NCQ2|I1NCQ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0796100
Domains
15
LotjaGi1g1v0796700.1
– RNA binding protein; TAIR: AT1G01080.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic; TrEMBL-Plants: tr|A0A151TY51|A0A151TY51_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0796700
Domains
11
LotjaGi2g1v0001000.1
– RNA-dependent RNA polymerase; TAIR: AT1G14790.1 RNA-dependent RNA polymerase 1; Swiss-Prot: sp|Q9LQV2|RDR1_ARATH RNA-dependent RNA polymerase 1; TrEMBL-Plants: tr|K7K760|K7K760_SOYBN RNA-dependent RNA polymerase; Found in the gene: LotjaGi2g1v0001000
Domains
7
LotjaGi2g1v0001000.2
– RNA-dependent RNA polymerase; TAIR: AT1G14790.1 RNA-dependent RNA polymerase 1; Swiss-Prot: sp|Q9LQV2|RDR1_ARATH RNA-dependent RNA polymerase 1; TrEMBL-Plants: tr|K7K760|K7K760_SOYBN RNA-dependent RNA polymerase; Found in the gene: LotjaGi2g1v0001000
Domains
7
LotjaGi2g1v0011100_LC.1
– RNA binding protein; TAIR: AT3G16380.1 poly(A) binding protein 6; Swiss-Prot: sp|Q0U6E7|EIF3G_PHANO Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|A9TNB3|A9TNB3_PHYPA Eukaryotic translation initiation factor 3 subunit G; Found in the gene: LotjaGi2g1v0011100_LC
Domains
10
LotjaGi2g1v0068700_LC.1
– RNA binding protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q10422|YDC1_SCHPO Uncharacterized RNA-binding protein C25G10.01; TrEMBL-Plants: tr|V7AKK8|V7AKK8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0068700_LC
Domains
14
LotjaGi2g1v0084600_LC.1
– RNA-binding protein; TAIR: AT5G19030.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic; TrEMBL-Plants: tr|A0A151UBV0|A0A151UBV0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0084600_LC
Domains
12
LotjaGi2g1v0103500_LC.1
– RNA binding protein; TAIR: AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q04836|CP31A_ARATH 31 kDa ribonucleoprotein, chloroplastic; TrEMBL-Plants: tr|A0A151UBV0|A0A151UBV0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0103500_LC
Domains
13
LotjaGi2g1v0127700_LC.1
– RNA-binding protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q54Y98|TRA2_DICDI Transformer-2 protein homolog; TrEMBL-Plants: tr|A0A0E0AGI1|A0A0E0AGI1_9ORYZ Uncharacterized protein; Found in the gene: LotjaGi2g1v0127700_LC
Domains
10
LotjaGi2g1v0167100_LC.1
– RNA binding protein-like protein; TAIR: AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q6DRC4|EIF3G_DANRE Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|A0A176W8E9|A0A176W8E9_MARPO Uncharacterized protein; Found in the gene: LotjaGi2g1v0167100_LC
Domains
9
LotjaGi2g1v0167400.1
– RNA-binding protein; TAIR: AT1G27050.1 homeobox leucine zipper protein; Swiss-Prot: sp|P0CJ66|Y1705_ARATH Uncharacterized protein At1g27050; TrEMBL-Plants: tr|A0A151SI18|A0A151SI18_CAJCA Homeobox-leucine zipper protein ATHB-54; Found in the gene: LotjaGi2g1v0167400
Domains
10
LotjaGi2g1v0315000_LC.1
– Eukaryotic translation initiation factor 3 subunit G; TAIR: AT1G70200.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|B4LVR8|EI3GB_DROVI Eukaryotic translation initiation factor 3 subunit G-B; TrEMBL-Plants: tr|I3SWE0|I3SWE0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0315000_LC
Domains
11
LotjaGi2g1v0315100.1
– Eukaryotic translation initiation factor 3 subunit G-A; TAIR: AT1G70200.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O13620|MRD1_SCHPO Multiple RNA-binding domain-containing protein 1; TrEMBL-Plants: tr|V7CJM4|V7CJM4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0315100
Domains
10
LotjaGi2g1v0360600.1
– 23S rRNA (Uracil-5-)-methyltransferase; TAIR: AT2G28450.1 zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q8L7S3|C3H24_ARATH Zinc finger CCCH domain-containing protein 24; TrEMBL-Plants: tr|K7LTE4|K7LTE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0360600
Domains
23
LotjaGi3g1v0069400.1
– RNA binding protein, putative; TAIR: AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|V7AP69|V7AP69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0069400
Domains
12
LotjaGi3g1v0069400.2
– RNA binding protein, putative; TAIR: AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|V7AP69|V7AP69_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0069400
Domains
12
LotjaGi3g1v0103400_LC.1
– RNA binding protein, putative; TAIR: AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1; TrEMBL-Plants: tr|K4AYS0|K4AYS0_SOLLC Uncharacterized protein; Found in the gene: LotjaGi3g1v0103400_LC
Domains
9
LotjaGi3g1v0114800.1
– RNA-binding region RNP-1 protein; TAIR: AT1G05970.2 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q8WXF1|PSPC1_HUMAN Paraspeckle component 1; TrEMBL-Plants: tr|A0A0L9UJ06|A0A0L9UJ06_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0114800
Domains
6
LotjaGi3g1v0239500_LC.1
– RNA binding protein, putative; TAIR: AT1G71770.1 poly(A)-binding protein 5; Swiss-Prot: sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A; TrEMBL-Plants: tr|A0A059LEF8|A0A059LEF8_9CHLO Uncharacterized protein; Found in the gene: LotjaGi3g1v0239500_LC
Domains
5
LotjaGi3g1v0420200_LC.1
– Glycine-rich RNA-binding-like protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q9FMG4|SC35_ARATH Serine/arginine-rich splicing factor SC35; TrEMBL-Plants: tr|V7BPL0|V7BPL0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0420200_LC
Domains
12
LotjaGi3g1v0476700.1
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TNT3|A0A151TNT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0476700
Domains
15
LotjaGi3g1v0476700.2
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TNT3|A0A151TNT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0476700
Domains
15
LotjaGi3g1v0476700.3
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TNT3|A0A151TNT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0476700
Domains
15
LotjaGi3g1v0476700.4
– RNA-binding protein; TAIR: AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|A0A151TNT3|A0A151TNT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0476700
Domains
15
LotjaGi4g1v0020400.1
– RNA binding protein, putative; TAIR: AT4G20030.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing protein 1; TrEMBL-Plants: tr|A0A0L9T583|A0A0L9T583_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0020400
Domains
16
LotjaGi4g1v0080400_LC.1
– RNA-binding protein; TAIR: AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q15415|RBY1F_HUMAN RNA-binding motif protein, Y chromosome, family 1 member F/J; TrEMBL-Plants: tr|V7ARG7|V7ARG7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0080400_LC
Domains
11
LotjaGi4g1v0087400.1
– RNA binding protein, putative; TAIR: AT3G25150.2 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|O94260|G3BP_SCHPO Putative G3BP-like protein; TrEMBL-Plants: tr|A0A0S3R2J6|A0A0S3R2J6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0087400
Domains
21
LotjaGi4g1v0087400.2
– RNA binding protein, putative; TAIR: AT1G13730.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|O94260|G3BP_SCHPO Putative G3BP-like protein; TrEMBL-Plants: tr|A0A1J7G1P1|A0A1J7G1P1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0087400
Domains
21
LotjaGi4g1v0094700_LC.1
– RNA-binding protein 47; TAIR: AT3G16380.1 poly(A) binding protein 6; Swiss-Prot: sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic and nuclear; TrEMBL-Plants: tr|V7AUW5|V7AUW5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0094700_LC
Domains
14
LotjaGi4g1v0126000.1
– RNA binding protein, putative; TAIR: AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q; TrEMBL-Plants: tr|K7MH19|K7MH19_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0126000
Domains
14
LotjaGi4g1v0150500.1
– RNA recognition motif; TAIR: AT1G22760.1 poly(A) binding protein 3; Swiss-Prot: sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3; TrEMBL-Plants: tr|V7CTU7|V7CTU7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0150500
Domains
12
LotjaGi4g1v0158900_LC.1
– RNA-binding protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q0U6E7|EIF3G_PHANO Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|I1Q8J4|I1Q8J4_ORYGL Uncharacterized protein; Found in the gene: LotjaGi4g1v0158900_LC
Domains
11
LotjaGi4g1v0198400_LC.1
– RNA binding protein; TAIR: AT5G47320.1 ribosomal protein S19; Swiss-Prot: sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial; TrEMBL-Plants: tr|A0A1D6K4S8|A0A1D6K4S8_MAIZE Uncharacterized protein; Found in the gene: LotjaGi4g1v0198400_LC
Domains
10
LotjaGi4g1v0243300_LC.1
– RNA-binding family protein, putative; TAIR: AT5G54900.1 RNA-binding protein 45A; Swiss-Prot: sp|Q1HE00|EIF3G_BOMMO Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|V7BYR1|V7BYR1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0243300_LC
Domains
16
LotjaGi4g1v0243400_LC.1
– RNA-binding protein; TAIR: AT5G61030.1 glycine-rich RNA-binding protein 3; Swiss-Prot: sp|Q9FNR1|RBG3_ARATH Glycine-rich RNA-binding protein 3, mitochondrial; TrEMBL-Plants: tr|I3S9G5|I3S9G5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0243400_LC
Domains
11
LotjaGi4g1v0255500.1
– Nuclear transport factor 2 family protein with RNA binding domain; TAIR: AT5G60980.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|Q9UN86|G3BP2_HUMAN Ras GTPase-activating protein-binding protein 2; TrEMBL-Plants: tr|A0A151SPE4|A0A151SPE4_CAJCA Ras GTPase-activating protein-binding protein 1; Found in the gene: LotjaGi4g1v0255500
Domains
21
LotjaGi4g1v0265700.1
– RNA-binding family protein, putative; TAIR: AT5G19960.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q8R0F5|RBMX2_MOUSE RNA-binding motif protein, X-linked 2; TrEMBL-Plants: tr|I1MUC9|I1MUC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0265700
Domains
13
LotjaGi4g1v0372200.1
– RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200
Domains
24
LotjaGi4g1v0372200.2
– RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200
Domains
24
LotjaGi4g1v0372200.3
– RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200
Domains
24
LotjaGi5g1v0140000_LC.2
– RNA binding protein; TAIR: AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q5R1W5|SRSF2_PANTR Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|V7AKK8|V7AKK8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0140000_LC
Domains
16
LotjaGi5g1v0141400_LC.1
– Serine/arginine rich splicing factor, putative; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q9BRL6|SRSF8_HUMAN Serine/arginine-rich splicing factor 8; TrEMBL-Plants: tr|A0A0B2S401|A0A0B2S401_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0141400_LC
Domains
11
LotjaGi5g1v0177800_LC.1
– RNA-binding family protein, putative; TAIR: AT3G08000.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q3MHR5|SRSF2_BOVIN Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|V7BPL0|V7BPL0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0177800_LC
Domains
13
LotjaGi5g1v0238300.1
– DUF4283 domain protein; TAIR: AT3G31430.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q48513|PFAP_LEPBO Putative peptidase PfaP; TrEMBL-Plants: tr|V7B3B1|V7B3B1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0238300
Domains
8
LotjaGi5g1v0263400_LC.1
– RNA binding protein, putative; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q3MHR5|SRSF2_BOVIN Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A151TZU6|A0A151TZU6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0263400_LC
Domains
14
LotjaGi6g1v0010100.1
– Nuclear transport factor 2 family protein with RNA binding domain; TAIR: AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein; Swiss-Prot: sp|O94260|G3BP_SCHPO Putative G3BP-like protein; TrEMBL-Plants: tr|A0A0L9TV93|A0A0L9TV93_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0010100
Domains
21
LotjaGi6g1v0015400.1
– Pentatricopeptide repeat-containing protein, putative; TAIR: AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein; Swiss-Prot: sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; TrEMBL-Plants: tr|A0A072VGX7|A0A072VGX7_MEDTR Pentatricopeptide (PPR) repeat protein; Found in the gene: LotjaGi6g1v0015400
Domains
23
LotjaGi6g1v0077900_LC.1
– RNA-binding protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q2H0U6|EIF3G_CHAGB Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|A0A087SFR6|A0A087SFR6_AUXPR Eukaryotic translation initiation factor 3 subunit G; Found in the gene: LotjaGi6g1v0077900_LC
Domains
16
LotjaGi6g1v0078900_LC.1
– RNA-binding protein; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|P30352|SRSF2_CHICK Serine/arginine-rich splicing factor 2; TrEMBL-Plants: tr|A0A0Q3FJ32|A0A0Q3FJ32_BRADI Uncharacterized protein; Found in the gene: LotjaGi6g1v0078900_LC
Domains
12
LotjaGi6g1v0115100_LC.1
– RNA-binding protein; TAIR: AT2G43410.1 RNA binding protein; Swiss-Prot: sp|Q54BM2|PAP1A_DICDI Polyadenylate-binding protein 1-A; TrEMBL-Plants: tr|C5X861|C5X861_SORBI Uncharacterized protein; Found in the gene: LotjaGi6g1v0115100_LC
Domains
11
LotjaGi6g1v0159500_LC.1
– RNA-binding protein; TAIR: AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q44554|RBPB_NOSS1 Putative RNA-binding protein RbpB; TrEMBL-Plants: tr|A0A0D6R7K1|A0A0D6R7K1_ARACU Uncharacterized protein; Found in the gene: LotjaGi6g1v0159500_LC
Domains
9
LotjaGi6g1v0255900_LC.1
– RNA binding protein, putative; TAIR: AT5G64200.1 serine/arginine-rich splicing factor-like protein, putative; Swiss-Prot: sp|Q0U6E7|EIF3G_PHANO Eukaryotic translation initiation factor 3 subunit G; TrEMBL-Plants: tr|C0JP24|C0JP24_LOTJA Putative basic helix-loop-helix protein BHLH6; Found in the gene: LotjaGi6g1v0255900_LC
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 0.77