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Lj3g3v0612690.1

Overview

Field Value
Gene ID Lj3g3v0612690
Transcript ID Lj3g3v0612690.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ATP synthase subunit delta', mitochondrial-like [Glycine max] gi|356504527|ref|XP_003521047.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13822
3 143 141 2.80E-84
IPR001469
PANTHER
PTHR13822:SF7
3 143 141 2.80E-84 –
Gene3D
G3DSA:2.60.15.10
6 100 95 8.40E-30
IPR020546
Hamap
MF_00530
13 133 121 13.25
IPR001469
CDD
cd12152
15 138 124 5.24E-34
IPR001469
Pfam
PF02823
15 87 73 6.80E-16
IPR020546
SUPERFAMILY
SSF51344
15 96 82 1.70E-18
IPR020546
ProDom
PD000944
20 101 82 4.00E-36
IPR020546
Gene3D
G3DSA:1.20.5.440
102 143 42 6.00E-10 –
Coils
Coil
110 130 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0015986
Biological process ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
Subterm of
GO:0045261
Cellular component Proton-transporting ATP synthase complex, catalytic core F(1) The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
Subterm of
Part of
GO:0046933
Molecular function Proton-transporting ATP synthase activity, rotational mechanism Enables the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj3g3v0612690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v0612690.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.