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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0766150 |
| Transcript ID | Lj3g3v0766150.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable calcium-binding protein CML41-like [Glycine max] gi|356508310|ref|XP_003522901.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 2 | 37 | 36 | 11.752 | ||
| PANTHER | 4 | 146 | 143 | 1.80E-53 | – | |
| Gene3D | 4 | 77 | 74 | 1.10E-11 | ||
| PANTHER | 4 | 146 | 143 | 1.80E-53 | – | |
| SUPERFAMILY | 5 | 145 | 141 | 2.23E-28 | ||
| SMART | 6 | 34 | 29 | 0.047 | ||
| Pfam | 10 | 29 | 20 | 0.0011 | ||
| ProSitePatterns | 15 | 27 | 13 | – | ||
| ProSiteProfiles | 42 | 77 | 36 | 11.222 | ||
| Pfam | 46 | 72 | 27 | 3.10E-04 | ||
| SMART | 46 | 74 | 29 | 0.34 | ||
| ProSitePatterns | 55 | 67 | 13 | – | ||
| ProSiteProfiles | 78 | 114 | 37 | 7.177 | ||
| Gene3D | 79 | 145 | 67 | 1.70E-16 | ||
| CDD | 82 | 145 | 64 | 3.88E-11 | ||
| SMART | 82 | 111 | 30 | 75 | ||
| Pfam | 97 | 144 | 48 | 2.20E-09 | ||
| ProSiteProfiles | 115 | 146 | 32 | 10.859 | ||
| SMART | 119 | 146 | 28 | 0.2 | ||
| ProSitePatterns | 128 | 140 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj3g3v0766150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0766150.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.