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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0950120 |
| Transcript ID | Lj3g3v0950120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: metal tolerance protein 10-like [Glycine max] gi|356528661|ref|XP_003532918.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | – | – | |
| Phobius | 1 | 108 | 108 | – | – | |
| PANTHER | 12 | 299 | 288 | 3.40E-192 | – | |
| PANTHER | 12 | 299 | 288 | 3.40E-192 | ||
| SUPERFAMILY | 106 | 298 | 193 | 7.72E-43 | – | |
| Gene3D | 108 | 298 | 191 | 8.50E-44 | ||
| Phobius | 109 | 128 | 20 | – | – | |
| TIGRFAM | 111 | 294 | 184 | 6.60E-24 | ||
| Pfam | 113 | 298 | 186 | 9.10E-35 | ||
| Phobius | 129 | 133 | 5 | – | – | |
| Phobius | 134 | 157 | 24 | – | – | |
| TMHMM | 136 | 158 | 23 | – | – | |
| Phobius | 158 | 177 | 20 | – | – | |
| Phobius | 178 | 197 | 20 | – | – | |
| TMHMM | 179 | 198 | 20 | – | – | |
| Phobius | 198 | 216 | 19 | – | – | |
| Phobius | 217 | 237 | 21 | – | – | |
| TMHMM | 218 | 240 | 23 | – | – | |
| Phobius | 238 | 299 | 62 | – | – | |
| TMHMM | 253 | 270 | 18 | – | – | |
| TMHMM | 274 | 293 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v0950120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0950120.1, powered by CORGI.
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