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Lj3g3v1101700.1

Overview

Field Value
Gene ID Lj3g3v1101700
Transcript ID Lj3g3v1101700.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: lysM domain receptor-like kinase 3-like [Cicer arietinum] gi|502082172|ref|XP_004487085.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 29 29 – –
MobiDBLite
mobidb-lite
1 74 74 – –
PANTHER
PTHR27001:SF194
14 251 238 2.30E-203 –
PANTHER
PTHR27001
14 251 238 2.30E-203 –
ProSiteProfiles
PS50011
56 402 347 24.669
IPR000719
SUPERFAMILY
SSF56112
87 397 311 2.85E-41
IPR011009
Gene3D
G3DSA:3.30.200.20
107 151 45 1.20E-06 –
Pfam
PF00069
130 393 264 7.40E-23
IPR000719
Gene3D
G3DSA:1.10.510.10
152 410 259 1.50E-28 –
PANTHER
PTHR27001
275 416 142 2.30E-203 –
PANTHER
PTHR27001:SF194
275 416 142 2.30E-203 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj3g3v1101700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1101700.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.