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Lj3g3v1113460.1

Overview

Field Value
Gene ID Lj3g3v1113460
Transcript ID Lj3g3v1113460.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like [Cicer arietinum] gi|502083782|ref|XP_004487563.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31945
1 321 321 8.90E-141 –
PANTHER
PTHR31945:SF17
1 321 321 8.90E-141 –
MobiDBLite
mobidb-lite
99 136 38 – –
CDD
cd00083
131 184 54 3.18E-13 –
SUPERFAMILY
SSF47459
131 197 67 7.85E-17
IPR011598
ProSiteProfiles
PS50888
132 181 50 15.262
IPR011598
Gene3D
G3DSA:4.10.280.10
134 197 64 2.00E-16
IPR011598
Pfam
PF00010
138 182 45 1.10E-08
IPR011598
SMART
SM00353
138 187 50 3.10E-14
IPR011598
Coils
Coil
178 198 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj3g3v1113460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1113460.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.