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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1132600 |
| Transcript ID | Lj3g3v1132600.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleobase-ascorbate transporter 12-like [Cicer arietinum] gi|502145690|ref|XP_004506135.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 161 | 161 | – | – | |
| MobiDBLite | 1 | 117 | 117 | – | – | |
| PANTHER | 97 | 368 | 272 | 0 | ||
| PANTHER | 97 | 368 | 272 | 0 | ||
| Pfam | 156 | 573 | 418 | 6.30E-69 | ||
| TMHMM | 161 | 183 | 23 | – | – | |
| Phobius | 162 | 181 | 20 | – | – | |
| Phobius | 182 | 186 | 5 | – | – | |
| TMHMM | 187 | 209 | 23 | – | – | |
| Phobius | 187 | 208 | 22 | – | – | |
| Phobius | 209 | 219 | 11 | – | – | |
| Phobius | 220 | 238 | 19 | – | – | |
| Phobius | 239 | 249 | 11 | – | – | |
| Phobius | 250 | 269 | 20 | – | – | |
| TMHMM | 252 | 274 | 23 | – | – | |
| Phobius | 270 | 275 | 6 | – | – | |
| Phobius | 276 | 294 | 19 | – | – | |
| Phobius | 295 | 299 | 5 | – | – | |
| TMHMM | 298 | 320 | 23 | – | – | |
| Phobius | 300 | 320 | 21 | – | – | |
| Phobius | 321 | 331 | 11 | – | – | |
| TMHMM | 327 | 349 | 23 | – | – | |
| Phobius | 332 | 352 | 21 | – | – | |
| Phobius | 353 | 412 | 60 | – | – | |
| PANTHER | 387 | 576 | 190 | 0 | ||
| PANTHER | 387 | 576 | 190 | 0 | ||
| TMHMM | 409 | 431 | 23 | – | – | |
| Phobius | 413 | 431 | 19 | – | – | |
| Phobius | 432 | 496 | 65 | – | – | |
| Phobius | 497 | 518 | 22 | – | – | |
| TMHMM | 497 | 519 | 23 | – | – | |
| Phobius | 519 | 523 | 5 | – | – | |
| Phobius | 524 | 543 | 20 | – | – | |
| TMHMM | 524 | 543 | 20 | – | – | |
| Phobius | 544 | 554 | 11 | – | – | |
| Phobius | 555 | 573 | 19 | – | – | |
| TMHMM | 556 | 573 | 18 | – | – | |
| Phobius | 574 | 609 | 36 | – | – | |
| PANTHER | 598 | 680 | 83 | 0 | ||
| PANTHER | 598 | 680 | 83 | 0 | ||
| TMHMM | 608 | 630 | 23 | – | – | |
| Phobius | 610 | 630 | 21 | – | – | |
| Phobius | 631 | 680 | 50 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v1132600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1132600.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.