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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1182320 |
| Transcript ID | Lj3g3v1182320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable calcium-binding protein CML48-like isoform X2 [Cicer arietinum] gi|502083544|ref|XP_004487492.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 78 | 78 | – | – | |
| PANTHER | 14 | 253 | 240 | 6.70E-135 | – | |
| PANTHER | 14 | 253 | 240 | 6.70E-135 | – | |
| SUPERFAMILY | 74 | 245 | 172 | 1.59E-31 | ||
| ProSiteProfiles | 79 | 114 | 36 | 11.919 | ||
| Gene3D | 83 | 246 | 164 | 3.60E-34 | ||
| Pfam | 83 | 110 | 28 | 1.20E-06 | ||
| CDD | 83 | 175 | 93 | 2.58E-08 | ||
| SMART | 83 | 111 | 29 | 1.90E-04 | ||
| ProSitePatterns | 92 | 104 | 13 | – | ||
| ProSiteProfiles | 146 | 181 | 36 | 12.561 | ||
| SMART | 150 | 178 | 29 | 0.021 | ||
| Pfam | 151 | 175 | 25 | 1.60E-05 | ||
| CDD | 152 | 211 | 60 | 6.36E-07 | ||
| ProSitePatterns | 159 | 171 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj3g3v1182320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1182320.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.