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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1238910 |
| Transcript ID | Lj3g3v1238910.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sucrose synthase 6-like isoform X1 [Cicer arietinum] gi|502173125|ref|XP_004515258.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | 1 | 668 | 668 | 0 | ||
| PANTHER | 1 | 670 | 670 | 0 | – | |
| Pfam | 1 | 419 | 419 | 6.20E-231 | ||
| Phobius | 1 | 738 | 738 | – | – | |
| PANTHER | 1 | 670 | 670 | 0 | – | |
| CDD | 144 | 629 | 486 | 2.34E-112 | – | |
| SUPERFAMILY | 161 | 629 | 469 | 7.46E-52 | – | |
| Gene3D | 405 | 613 | 209 | 1.10E-19 | – | |
| Pfam | 423 | 602 | 180 | 2.20E-32 | ||
| TMHMM | 738 | 760 | 23 | – | – | |
| Phobius | 739 | 760 | 22 | – | – | |
| Phobius | 761 | 775 | 15 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Sucrose metabolic process | The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside. | ||
| Molecular function | Sucrose synthase activity | Catalysis of the reaction: UDP-glucose + D-fructose = UDP + sucrose. |
Expression pattern of Lj3g3v1238910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1238910.1, powered by CORGI.
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