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Lj3g3v1461450.1

Overview

Field Value
Gene ID Lj3g3v1461450
Transcript ID Lj3g3v1461450.1
Lotus japonicus genome version MG20 v3.0
Description Uncharacterized protein TCM_005578 [Theobroma cacao] gi|508704405|gb|EOX96301.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 340 340 3.40E-207
Phobius 1 124 124
PANTHER 1 340 340 3.40E-207
Phobius 125 145 21
TMHMM 127 149 23
Phobius 146 156 11
TMHMM 156 178 23
Phobius 157 178 22
Phobius 179 198 20
TMHMM 198 220 23
Phobius 199 220 22
Phobius 221 231 11
TMHMM 232 254 23
Phobius 232 253 22
Phobius 254 264 11
Phobius 265 285 21
Phobius 286 304 19
TMHMM 300 322 23
Phobius 305 327 23
Phobius 328 350 23

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj3g3v1461450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1461450.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.