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Lj3g3v2044300.1

Overview

Field Value
Gene ID Lj3g3v2044300
Transcript ID Lj3g3v2044300.1
Lotus japonicus genome version MG20 v3.0
Description proton gradient regulation 7 [Arabidopsis thaliana] gi|18402922|ref|NP_566678.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13343:SF14
30 252 223 4.40E-110 –
PANTHER
PTHR13343
30 252 223 4.40E-110 –
Gene3D
G3DSA:2.30.110.10
50 197 148 7.10E-17
IPR012349
SUPERFAMILY
SSF50475
64 252 189 3.62E-21
IPR012349

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0048037
Molecular function Cofactor binding Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj3g3v2044300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2044300.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.